Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B11
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118976-1|AAM50836.2|  147|Drosophila melanogaster LP01241p pro...    34   0.30 
AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine de...    31   1.6  
AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-P...    31   1.6  
AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-P...    31   1.6  
AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-P...    31   1.6  
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro...    29   8.6  
BT029276-1|ABK30913.1|  251|Drosophila melanogaster IP09812p pro...    29   8.6  
AY118512-1|AAM49881.1|  911|Drosophila melanogaster LD14119p pro...    29   8.6  
AY089664-1|AAL90402.1|  251|Drosophila melanogaster RH30329p pro...    29   8.6  
AE014297-566|AAF54058.3|  251|Drosophila melanogaster CG33323-PA...    29   8.6  
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB...    29   8.6  
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA...    29   8.6  

>AY118976-1|AAM50836.2|  147|Drosophila melanogaster LP01241p
           protein.
          Length = 147

 Score = 33.9 bits (74), Expect = 0.30
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -3

Query: 369 TTTEARRPGTARNTRRPK-----PTELSACCRERSETPRHRNKPSRPVWSRR 229
           TTT + RP TA   R P+     PTE S   R+R  + R R  P+R   S R
Sbjct: 49  TTTTSTRPATASPPRSPELVETTPTEASRGTRQRVSSSRSRTWPTRTATSHR 100


>AF038597-1|AAC97538.1|  254|Drosophila melanogaster ornithine
           decarboxylase antizyme protein.
          Length = 254

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 294 SKRSALSASDAECFSLCLGAGPLWWS*CP 380
           S  S  +   +E + + LG GPLWWS  P
Sbjct: 36  STSSCATTMSSESYRISLGVGPLWWSDVP 64


>AE013599-1406|AAF58570.2|  248|Drosophila melanogaster CG16747-PB,
           isoform B protein.
          Length = 248

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 294 SKRSALSASDAECFSLCLGAGPLWWS*CP 380
           S  S  +   +E + + LG GPLWWS  P
Sbjct: 30  STSSCATTMSSESYRISLGVGPLWWSDVP 58


>AE013599-1405|AAF58567.2|  270|Drosophila melanogaster CG16747-PC,
           isoform C protein.
          Length = 270

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 294 SKRSALSASDAECFSLCLGAGPLWWS*CP 380
           S  S  +   +E + + LG GPLWWS  P
Sbjct: 52  STSSCATTMSSESYRISLGVGPLWWSDVP 80


>AE013599-1404|AAF58569.2|  254|Drosophila melanogaster CG16747-PA,
           isoform A protein.
          Length = 254

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 294 SKRSALSASDAECFSLCLGAGPLWWS*CP 380
           S  S  +   +E + + LG GPLWWS  P
Sbjct: 36  STSSCATTMSSESYRISLGVGPLWWSDVP 64


>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
           protein.
          Length = 1374

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 321 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 226
           P P  L +C R RS    H+   S P  SRRS
Sbjct: 671 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 702


>BT029276-1|ABK30913.1|  251|Drosophila melanogaster IP09812p
           protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 186 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 317
           S  +  Y N N   +  + Q    +SG GA +S PG+  S  S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247


>AY118512-1|AAM49881.1|  911|Drosophila melanogaster LD14119p
           protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 321 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 226
           P P  L +C R RS    H+   S P  SRRS
Sbjct: 196 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 227


>AY089664-1|AAL90402.1|  251|Drosophila melanogaster RH30329p
           protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 186 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 317
           S  +  Y N N   +  + Q    +SG GA +S PG+  S  S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247


>AE014297-566|AAF54058.3|  251|Drosophila melanogaster CG33323-PA
           protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 186 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSA 317
           S  +  Y N N   +  + Q    +SG GA +S PG+  S  S+
Sbjct: 204 SQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFSS 247


>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
           isoform B protein.
          Length = 1373

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 321 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 226
           P P  L +C R RS    H+   S P  SRRS
Sbjct: 658 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 689


>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
           isoform A protein.
          Length = 1553

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 321 PKPTELSACCRERSETPRHRNKPSRPVWSRRS 226
           P P  L +C R RS    H+   S P  SRRS
Sbjct: 658 PSPPVLRSCLRNRSLASLHKRSRSSPPSSRRS 689


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,461,838
Number of Sequences: 53049
Number of extensions: 559723
Number of successful extensions: 2542
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)