Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_B09
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0040 + 11816056-11819069,11819837-11820428                       29   6.7  
06_03_0904 + 25832026-25832643                                         29   6.7  

>09_03_0040 + 11816056-11819069,11819837-11820428
          Length = 1201

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -1

Query: 818 VRXKXXFPPXXGXXPXPPPXXPGXXVFXGGXGKGAQ 711
           V  K  +PP  G  P PPP  P   V      KG +
Sbjct: 31  VSAKRSWPPLCGRFPAPPPPPPTAPVAGDDGSKGVE 66


>06_03_0904 + 25832026-25832643
          Length = 205

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +2

Query: 101 MSQIAEEQKLEESDGLPPASSSSI-AAQEKPR 193
           M Q+A++  LE S GLP A++ +I AA+EK +
Sbjct: 156 MQQVADDYGLEVSVGLPQAAAHAIPAAKEKEK 187


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,902,526
Number of Sequences: 37544
Number of extensions: 219023
Number of successful extensions: 865
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)