Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_B05
(883 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 129 8e-29
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 123 7e-27
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 97 7e-19
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 69 1e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 42 0.016
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 36 1.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_UPI0000EB2447 Cluster: CDNA FLJ40246 fis, clone TESTI20... 33 7.3
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 33 7.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 129 bits (312), Expect = 8e-29
Identities = 62/78 (79%), Positives = 64/78 (82%)
Frame = +3
Query: 483 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 662
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 663 CRLRDTCPPFSFGKRGAF 716
CRL DTCPPFS + F
Sbjct: 62 CRLPDTCPPFSLREAWRF 79
Score = 76.6 bits (180), Expect = 8e-13
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 689 FLLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 790
F LREAWRFLIAHAVGISVRCRSFAPSWAVCTNP
Sbjct: 71 FSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 40.3 bits (90), Expect = 0.063
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 787 PPFSPTAAPYPVTIVLS 837
PPFSPTAAPYPVTIVLS
Sbjct: 104 PPFSPTAAPYPVTIVLS 120
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 123 bits (296), Expect = 7e-27
Identities = 71/116 (61%), Positives = 76/116 (65%)
Frame = +3
Query: 315 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 494
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 495 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 662
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 96.7 bits (230), Expect = 7e-19
Identities = 50/73 (68%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Frame = -1
Query: 790 GVRAHSPAWXERPTPN*DTYSVSYEKAPRFPK-EKGGQVSRKRQGRNRRAHEGASRGKRL 614
GVRA+SPAW ERP P+ DT SVSYEKAPRFPK +K QVS KRQGRNRRAHEGA+ K
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Query: 613 VSL*SCRVSPPLT 575
SL PPLT
Sbjct: 87 ASLSPVGFRPPLT 99
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2
Query: 846 PGXTQDDSYRIRRSGRAERG 787
PG TQDDSYR RS RAERG
Sbjct: 8 PGWTQDDSYRKGRSSRAERG 27
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 501 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 662
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 69.3 bits (162), Expect = 1e-10
Identities = 45/92 (48%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 604 IKIPGVSPWKLPRALSCSDPAAYGIPVR-LSPSGSVALSHSSRCRYLSSV*VVRXKLGCV 780
+KI VS LP ALSCS+PA IPV S +GSVALSHSS +
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 781 HEPPFSPTAAPYPVTIVLSXPX*XXLIPTGSS 876
PPFSPTAAPYPVT+ LS TGSS
Sbjct: 92 KNPPFSPTAAPYPVTVHLSPTRKSTQNATGSS 123
Score = 39.5 bits (88), Expect = 0.11
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2
Query: 734 GISVRCRSFAPSWAVCTNP 790
GIS RCRSFAPSWAV NP
Sbjct: 76 GISARCRSFAPSWAVSKNP 94
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 491 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 378
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 291 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 458
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 390 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 563
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 564 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 662
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = -2
Query: 849 LPGXTQDDSYRIRRSGRAERG 787
LPG TQDDSYRIRRSGRAERG
Sbjct: 7 LPGWTQDDSYRIRRSGRAERG 27
Score = 39.1 bits (87), Expect = 0.15
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -1
Query: 790 GVRAHSPAWXERPTPN 743
GVRAHSPAW ERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 410 HSKAVIRLSTESGDNAGKNM 469
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 694 PSGSVALSHSSRCRYLSSV 750
PSGSVALSHSSRCRYLSSV
Sbjct: 19 PSGSVALSHSSRCRYLSSV 37
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 641 VRSPVPTLPLTGYLSAFL 694
+RSPVPTLPLTGYLSAFL
Sbjct: 1 MRSPVPTLPLTGYLSAFL 18
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 42.3 bits (95), Expect = 0.016
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3
Query: 789 PVQPDRCALSGNYRLESTXV 848
PVQPDRCALSGNYRLES V
Sbjct: 5 PVQPDRCALSGNYRLESNPV 24
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 289 SALMNRPTRGERRFAYW 339
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 361 ERGSGRAPNTQTASPRALADSLMQ 290
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2
Query: 846 PGXTQDDSYRIRRSGRAERG 787
PG TQ +SYRIRRS RAERG
Sbjct: 8 PGWTQVNSYRIRRSSRAERG 27
Score = 34.7 bits (76), Expect = 3.2
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1
Query: 790 GVRAHSPAWXERPTPN*DT 734
GV A+SPAW ERPTP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 500 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 378
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 172 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 339
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI0000EB2447 Cluster: CDNA FLJ40246 fis, clone
TESTI2024009.; n=1; Canis lupus familiaris|Rep: CDNA
FLJ40246 fis, clone TESTI2024009. - Canis familiaris
Length = 182
Score = 33.5 bits (73), Expect = 7.3
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Frame = +3
Query: 432 YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQD--- 602
+ Q QE+ A RP + RP C FS G P + ++A G R +
Sbjct: 30 FTQKADFNQEQKWPSPADYRP--LSRPACPAFSFGG-PRPASKALEAPSGRGLLRTEGAG 86
Query: 603 -------YKDTRRFPLEAPSCALLFRPCRLRDTCPP-FSFGKRGAFS 719
+ R+ P +P+ +F CRLR PP FS + AF+
Sbjct: 87 IRAQPPLAPEARKLPSPSPNTYNIFPGCRLRSPRPPAFSMSRSPAFT 133
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = -3
Query: 692 ERRTGIP*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPAT 513
ER G+ GS+Q S+ G++P + GFA+ + +F +A GG + +P +
Sbjct: 574 ERLKGL--GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYS 631
Query: 512 RPFYGSWP 489
P Y S P
Sbjct: 632 TPSYLSVP 639
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 862,820,280
Number of Sequences: 1657284
Number of extensions: 18166856
Number of successful extensions: 50386
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 47774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50366
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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