Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A19
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 193 1e-49
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 193 1e-49
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 193 1e-49
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.1
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 28 7.2
Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical pr... 28 9.5
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 193 bits (471), Expect = 1e-49
Identities = 87/119 (73%), Positives = 102/119 (85%)
Frame = +3
Query: 237 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 416
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 417 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPE 593
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKD 123
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +2
Query: 710 GXHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDG 838
G HNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DG
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDG 204
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 592 NGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 690
+G+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 193 bits (471), Expect = 1e-49
Identities = 87/119 (73%), Positives = 102/119 (85%)
Frame = +3
Query: 237 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 416
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 417 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPE 593
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKD 123
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +2
Query: 710 GXHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDG 838
G HNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DG
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDG 204
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 592 NGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 690
+G+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 193 bits (471), Expect = 1e-49
Identities = 87/119 (73%), Positives = 102/119 (85%)
Frame = +3
Query: 237 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 416
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 417 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPE 593
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F +
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKD 123
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +2
Query: 710 GXHNLYKMFREGLLKVPAINVNDSVTKSKFDNLYGCRESLLDG 838
G HNL KM +G LKVPAINVNDSVTKSKFDNLYG RESL DG
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKSKFDNLYGIRESLPDG 204
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 592 NGKPLNMILDDGGDLTNLVHTKYPDLLKDVKGI 690
+G+PLNMILDDGGDLTNLVH KYP L ++G+
Sbjct: 123 DGQPLNMILDDGGDLTNLVHAKYPQYLAGIRGL 155
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 500 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 342
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 728 KMFREGLLKVPAINVNDSVTKSKFDNLYGCRESL 829
+M+ LLK+P+I + SV F+N +G SL
Sbjct: 154 EMYLAHLLKIPSIPIKSSVRYPAFNNAFGQPSSL 187
>Z82080-2|CAB04951.1| 428|Caenorhabditis elegans Hypothetical
protein W09G3.2 protein.
Length = 428
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 755 VPAINVNDSVTKSKFDNLYGCRESLLDGN 841
V + + D V F+N+Y +++LLDGN
Sbjct: 174 VKEMELEDLVDVDVFENMYAVQQALLDGN 202
>Z81512-4|CAB04170.1| 550|Caenorhabditis elegans Hypothetical
protein F25C8.4 protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 275 FSQFLVSDFVRRLHFVVQSLIYLXVNSLAV 186
F+QF D +++ F+ +SL+YL V V
Sbjct: 40 FAQFTFQDVMQKADFIAKSLVYLKVEKSEV 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,257,298
Number of Sequences: 27780
Number of extensions: 379578
Number of successful extensions: 831
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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