Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_A16
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0044 - 21819193-21819418,21819531-21820759                       31   0.94 
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828...    30   2.2  
06_03_0434 + 20725996-20726026,20726300-20726947,20727168-207272...    30   2.9  
04_04_0254 - 23951495-23951902,23952000-23952155,23952344-239524...    29   3.8  

>05_05_0044 - 21819193-21819418,21819531-21820759
          Length = 484

 Score = 31.5 bits (68), Expect = 0.94
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 364 MPLLLTILERRRKRPQLMNRSTTWDPILARS 456
           MPL L +L+R++++ QL+ R T WD  L  S
Sbjct: 112 MPLSLRMLKRKKQQQQLVARQTRWDERLLGS 142


>07_03_1483 +
           26881032-26882035,26882130-26882204,26882324-26882861,
           26883999-26884895,26885178-26885327,26885459-26885791,
           26886501-26886695,26887805-26887918
          Length = 1101

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 151 LWLT-SSKALGLGIIICHPGCKL 86
           LWL  +S ++G G IICH GC L
Sbjct: 336 LWLVQNSNSIGQGYIICHLGCHL 358


>06_03_0434 +
           20725996-20726026,20726300-20726947,20727168-20727230,
           20727300-20727458,20727750-20728247,20729068-20729321,
           20729448-20729829,20729938-20730204,20730530-20730789
          Length = 853

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +1

Query: 394 RRKRPQLMNRSTTWDPILARSLXQETYSQNFEFGGYIDQVERTYEALRGVDPRLDRR 564
           RR  P+L  +      ILA  L    YS+ F   G  + + + Y  +  +D +LD+R
Sbjct: 321 RRCHPELYEQDKDVIGILANVLRSNPYSEQFRSLGQAEDL-KNYRVMLNLDQKLDQR 376


>04_04_0254 -
           23951495-23951902,23952000-23952155,23952344-23952485,
           23952772-23953160,23953833-23953948,23954290-23954371
          Length = 430

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -2

Query: 218 GTRRHGDRSCCLASHHQRDCHAVVVDLFQSLG-PGYYYLPSWLQIAISLFIQQ 63
           G   HG   C L +H         +D     G  G  YL SWLQIA+   I++
Sbjct: 116 GENFHGKIGCILRNHSGISLKTFKLDYSGMCGFDGTSYLDSWLQIALKPGIEE 168


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,008,112
Number of Sequences: 37544
Number of extensions: 416641
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)