Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_A16
         (897 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130611-1|AAI30612.1|  942|Homo sapiens inturned planar cell po...    32   3.2  
AB033110-1|BAA86598.1|  953|Homo sapiens KIAA1284 protein protein.     32   3.2  
AL109978-1|CAB53376.1|  318|Homo sapiens hypothetical protein pr...    31   7.5  
AL031447-4|CAI19467.1|  332|Homo sapiens DnaJ (Hsp40) homolog, s...    31   7.5  

>BC130611-1|AAI30612.1|  942|Homo sapiens inturned planar cell
           polarity effector homolog (Drosophila) protein.
          Length = 942

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 499 YIDQVERTYEALRGVDPRLDRRMPFXYVP 585
           Y+DQV+ T   L GVD R+D R+    VP
Sbjct: 624 YVDQVKTTLHQLDGVDSRIDERLASSPVP 652


>AB033110-1|BAA86598.1|  953|Homo sapiens KIAA1284 protein protein.
          Length = 953

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +1

Query: 499 YIDQVERTYEALRGVDPRLDRRMPFXYVP 585
           Y+DQV+ T   L GVD R+D R+    VP
Sbjct: 635 YVDQVKTTLHQLDGVDSRIDERLASSPVP 663


>AL109978-1|CAB53376.1|  318|Homo sapiens hypothetical protein
           protein.
          Length = 318

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 442 ILARSLXQETYSQ-NFEFGGYIDQVERTYEALRGVDPRLDRRMPFXYVPTFDVYCS 606
           +LAR+L + T     +     + QV+R +   R   P    R PF +VPT+D  CS
Sbjct: 219 VLARNLDKNTVGYLQWHCSSPLLQVQRPHRNTRACAPEPSFR-PFLHVPTWDAECS 273


>AL031447-4|CAI19467.1|  332|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 11 protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 442 ILARSLXQETYSQ-NFEFGGYIDQVERTYEALRGVDPRLDRRMPFXYVPTFDVYCS 606
           +LAR+L + T     +     + QV+R +   R   P    R PF +VPT+D  CS
Sbjct: 233 VLARNLDKNTVGYLQWHCSSPLLQVQRPHRNTRACAPEPSFR-PFLHVPTWDAECS 287


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,257,284
Number of Sequences: 237096
Number of extensions: 2398728
Number of successful extensions: 5087
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5087
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)