Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A15
(960 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.45
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.4
01_03_0005 + 11568545-11569119,11569179-11569191 30 2.4
03_01_0515 - 3864796-3865425 25 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.1
02_04_0382 - 22501041-22501279,22501717-22501810 30 3.1
02_05_0686 - 30900748-30902167,30903442-30904742 28 4.7
07_03_1382 - 26170563-26170631,26171151-26171843 29 5.5
07_01_0080 + 587674-588510 29 5.5
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 5.5
11_04_0043 + 12703579-12703648,12704412-12704484,12705604-127058... 29 7.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 26 7.6
07_03_1136 + 24218601-24218734,24218769-24219906 28 9.6
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 9.6
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 28 9.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 9.6
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 32.7 bits (71), Expect = 0.45
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +1
Query: 448 PGXKNPPXPGXRGXGXXGPPPXPPP*TP 531
PG PP PG G G GPPP P P
Sbjct: 366 PGPGPPPPPGAAGRGGGGPPPPALPGGP 393
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 466 PXPGXRGXGXXGPPPXPPP*TP 531
P P G G GPPP PPP P
Sbjct: 338 PSPSAAGAGS-GPPPPPPPAAP 358
Score = 26.2 bits (55), Expect(2) = 3.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 704 PPXPPXXXXKNRPPPRXXGXKPPRG 778
PP PP RPP G PP G
Sbjct: 351 PPPPPAAPAAPRPPGPGPGPPPPPG 375
Score = 21.8 bits (44), Expect(2) = 3.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 893 PPARKPGGPNXTKRPP 940
PP PGGP PP
Sbjct: 385 PPPALPGGPRARGPPP 400
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +1
Query: 403 LPLXXXXPGXGGXXSPGXKNPPXPGXRGXGXXGP-PPXPPP 522
LP G G +P PP P R G P PP PPP
Sbjct: 697 LPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.3 bits (65), Expect = 2.4
Identities = 24/78 (30%), Positives = 29/78 (37%)
Frame = -2
Query: 914 PXVSSQGGXXXGXXFXVXXXGXXTPXRGTPGGVXXGEXXLXLFFXFPVGVXXPXXGGAGG 735
P GG G V P G GG G + ++ P G GG GG
Sbjct: 72 PPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGI--YYPPPTG---GGGGGGGG 126
Query: 734 FXXGXPGGGGAFLXXXPP 681
+ G GGGGA+ PP
Sbjct: 127 WQQGG-GGGGAYPTPPPP 143
>03_01_0515 - 3864796-3865425
Length = 209
Score = 24.6 bits (51), Expect(2) = 3.1
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2
Query: 881 PXXXPPARKPGGPNXTKRPPXGGWPP 958
P PP+ P P + PP W P
Sbjct: 99 PPPPPPSPPPPSPVKSSPPPPPAWSP 124
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 704 PPXPPXXXXKNRPPPRXXGXKPP 772
PP PP + PPP PP
Sbjct: 72 PPPPPPSVTSSPPPPPLPPPPPP 94
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Frame = +1
Query: 433 GGXXSP---GXKNPPXPGXRGXGXXGPPPXPP 519
GG P G PP P RG G G PP PP
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPP 1202
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 463 PPXPGXRGXGXXGPPPXPPP*TP 531
PP P G G G PP PPP P
Sbjct: 84 PPSPYYGGGGGYGKPPPPPPCCP 106
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 448 PGXKNPPXPGXRGXGXXGPPPXPP 519
P +PP P G GPPP PP
Sbjct: 359 PKGPSPPPPPPPGGKKGGPPPPPP 382
Score = 23.8 bits (49), Expect(2) = 4.7
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +2
Query: 704 PPXPPXXXXKNRPPPRXXGXKPP 772
PP PP PPP+ PP
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPP 349
Score = 23.8 bits (49), Expect(2) = 4.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 893 PPARKPGGPNXTKRPPXGG 949
PP P GP+ PP GG
Sbjct: 354 PPPPPPKGPSPPPPPPPGG 372
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 451 GXKNPPXPGXRGXGXXGPPPXPPP 522
G PP P G PPP PPP
Sbjct: 183 GPPPPPPPQPSGDANENPPPPPPP 206
>07_01_0080 + 587674-588510
Length = 278
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 424 PGXGGXXSPGXKNPPXPGXRGXGXXGPPPXPPP*TP 531
P GG PP P G PPP PPP P
Sbjct: 80 PRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPP 115
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 8/40 (20%)
Frame = +1
Query: 427 GXGGXXSP-GXKNPPXPGXRGXGXXG-------PPPXPPP 522
G GG SP K PP P R G PPP PPP
Sbjct: 24 GGGGGFSPTAAKPPPPPSPRANGTAAAAKPSASPPPPPPP 63
>11_04_0043 +
12703579-12703648,12704412-12704484,12705604-12705834,
12705874-12706540
Length = 346
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 427 GXGGXXSPGXKNPPXPGXRGXG-XXGPPPXPPP*TP 531
G G SP ++ P P G G G PP PPP P
Sbjct: 256 GMEGHISPVREDEPHPQDNGEGVLQGLPPSPPPLYP 291
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 25.8 bits (54), Expect(2) = 7.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 881 PXXXPPARKPGGPNXTKRPPXGGWP 955
P PP KPGGP PP G P
Sbjct: 929 PPPPPPPGKPGGP-PPPPPPPGSLP 952
Score = 21.0 bits (42), Expect(2) = 7.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 740 PPPRXXGXKPP 772
PPPR G PP
Sbjct: 921 PPPRPPGAPPP 931
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -2
Query: 758 PXXGGAGGFXXGXPGGGGAFLXXXPPXGXXFGXXGPXLCP 639
P GG GG PGGGG G G GP P
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAP 199
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 445 SPGXKNPPXPGXRGXGXXGPPPXPPP*TP 531
SP +PP P PPP PPP P
Sbjct: 58 SPPPASPPLPSATPPLAASPPPPPPPPPP 86
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -2
Query: 779 FPVGVXXPXXGGAGGFXXGXPGGGG 705
F G P GG GG+ G GGGG
Sbjct: 91 FGGGAGGPLGGGGGGWGAGGGGGGG 115
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 457 KNPPXPGXRGXGXXGPPPXPPP*TP 531
K P PG G GPP PPP P
Sbjct: 249 KPPAAPGTLPNGSGGPPRPPPPQVP 273
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,563,048
Number of Sequences: 37544
Number of extensions: 257230
Number of successful extensions: 3845
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2776393380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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