Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A08
(873 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p pro... 47 4e-05
AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein... 47 4e-05
AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subu... 47 4e-05
AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA... 47 4e-05
U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein. 36 0.073
BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p pro... 36 0.073
BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p pro... 36 0.073
AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB... 36 0.073
AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA... 36 0.073
AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA... 31 1.6
AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p pro... 31 2.1
>AY118636-1|AAM50005.1| 1238|Drosophila melanogaster SD02122p
protein.
Length = 1238
Score = 46.8 bits (106), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 540 RDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
RDI F +L + EVKA+E RK E+L ++ ++ GK L +DQ+I+ FE ++
Sbjct: 256 RDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQM 314
>AJ271845-1|CAB76376.1| 1238|Drosophila melanogaster SMC1 protein
protein.
Length = 1238
Score = 46.8 bits (106), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 540 RDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
RDI F +L + EVKA+E RK E+L ++ ++ GK L +DQ+I+ FE ++
Sbjct: 256 RDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQM 314
>AF225909-1|AAF43149.1| 1238|Drosophila melanogaster cohesin subunit
protein.
Length = 1238
Score = 46.8 bits (106), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 540 RDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
RDI F +L + EVKA+E RK E+L ++ ++ GK L +DQ+I+ FE ++
Sbjct: 256 RDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQM 314
>AE014297-3454|AAF56231.1| 1238|Drosophila melanogaster CG6057-PA
protein.
Length = 1238
Score = 46.8 bits (106), Expect = 4e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +3
Query: 540 RDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
RDI F +L + EVKA+E RK E+L ++ ++ GK L +DQ+I+ FE ++
Sbjct: 256 RDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQM 314
>U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein.
Length = 1231
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
IA FE++L +E+K+ E+ N ++ + + ++GK + E + +I++ +EEL
Sbjct: 721 IAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEEL 777
>BT029133-1|ABJ17066.1| 1054|Drosophila melanogaster IP16426p
protein.
Length = 1054
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
IA FE++L +E+K+ E+ N ++ + + ++GK + E + +I++ +EEL
Sbjct: 544 IAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEEL 600
>BT023768-1|AAZ41776.1| 1200|Drosophila melanogaster RE14758p
protein.
Length = 1200
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
IA FE++L +E+K+ E+ N ++ + + ++GK + E + +I++ +EEL
Sbjct: 690 IAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEEL 746
>AE014298-2426|AAN09411.1| 1054|Drosophila melanogaster CG9802-PB,
isoform B protein.
Length = 1054
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
IA FE++L +E+K+ E+ N ++ + + ++GK + E + +I++ +EEL
Sbjct: 544 IAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEEL 600
>AE014298-2425|AAF48625.2| 1200|Drosophila melanogaster CG9802-PA,
isoform A protein.
Length = 1200
Score = 35.9 bits (79), Expect = 0.073
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
IA FE++L +E+K+ E+ N ++ + + ++GK + E + +I++ +EEL
Sbjct: 690 IAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIRLMKEEL 746
>AE013599-3585|AAF46990.2| 1489|Drosophila melanogaster CG3493-PA
protein.
Length = 1489
Score = 31.5 bits (68), Expect = 1.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 528 EGRLRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 695
E +D+A + L AK E+KA ++ NK+ + Q + ++ RLE L ++
Sbjct: 742 EALSQDLATSQASLLAKEKELKASGNKLNKIKKQHEQHQAKSSDQSARLEALQSEL 797
>AY075577-1|AAL68382.1| 1489|Drosophila melanogaster SD05887p
protein.
Length = 1489
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +3
Query: 528 EGRLRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDI 695
E +D+A + L AK E+KA ++ NK+ + Q + +++ RLE L +
Sbjct: 742 EALSQDLATSQASLLAKEKELKASGNKLNKIKKQHEQHQAKSSEQSVRLEALQSQL 797
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,018,495
Number of Sequences: 53049
Number of extensions: 544137
Number of successful extensions: 1607
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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