Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A08
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 33 0.20
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 32 0.47
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 32 0.47
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 32 0.62
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 32 0.62
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 30 1.9
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 30 2.5
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 4.3
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 7.6
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Frame = +3
Query: 558 EEELFAKTDEVKAL-ESRKNKLLEMLNQQAEEKGKRAE---RLENLDQDIKMFEEEL 716
E+EL AKT E+ ++ E KNK +++ + ++ + K AE NL++ ++ F EEL
Sbjct: 154 EDELSAKTHEIFSIGEELKNKTMKLNEKNSQFQTKLAEISSENRNLERKVQKFREEL 210
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +3
Query: 540 RDIAPFEEELFAKTDEVKALESR-------KNKLLEMLNQQAEEKGKRAERLENLDQDIK 698
RD+ E++L K +++ L++R K K+ + ++ E+ + R+ENL+ +
Sbjct: 92 RDVTLLEDDLKQKESQIRILQNRCLRLETEKQKMQDTISGYQEDLKENEIRIENLNSRLH 151
Query: 699 MFEEEL 716
E+EL
Sbjct: 152 KLEDEL 157
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 543 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
++ E+E KT E K ++ R +L E + + EE + + EN+ QD+ +E++
Sbjct: 3358 ELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKEEYAQLIGQAENIKQDLLSVQEKV 3415
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 32.3 bits (70), Expect = 0.47
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 543 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
++ E+E KT E K ++ R +L E + + EE + + EN+ QD+ +E++
Sbjct: 3358 ELKRLEQEAAKKTQEGKVVDVRITELEESIGKYKEEYAQLIGQAENIKQDLLSVQEKV 3415
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 543 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++ E+L
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQL 1359
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 543 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++ E+L
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQL 1359
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 543 DIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
D+A EEL AK L+ + + L+ +QAEE+ + + L NL +++ E+L
Sbjct: 1302 DLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQL 1359
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +3
Query: 537 LRDIAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
L + ++EL K +E+K + ++ +LLE + E + K A E +++I+ F+ ++
Sbjct: 761 LDQMGTIKDELVKKNEEIKTISAKTAQLLE--SNTVESETKLASVTEEREKEIQSFQTQI 818
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 615 KLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
K++EML +Q + G+R E + ++Q+ K EEL
Sbjct: 174 KVVEMLKEQRKSLGERVEEEKRMEQEQKKMLEEL 207
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 546 IAPFEEELFAKTDEVKALESRKNKLLEM-LNQQAEEKGKR 662
+AP EEE K E + + RK K LEM N++ EEK K+
Sbjct: 1002 LAPTEEEKRKKKQEEEEEKKRKEKELEMKKNKEEEEKLKK 1041
>Z34801-3|CAA84327.1| 520|Caenorhabditis elegans Hypothetical
protein F59A2.2 protein.
Length = 520
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Frame = +3
Query: 591 KALESRKNKLLEMLNQQ---------AEEKGKRAERLENLDQDIKMFEEE 713
KALES KN+++E L++ EE+ KR E +L+ +I+ +EE
Sbjct: 356 KALESEKNEMIEKLSEAKAQGVKAVLEEEERKRTEMETDLNDEIERLKEE 405
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 528 EGRLRD-IAPFEEELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMF 704
+GRL + + E++L + LE K KLL L + ++ ++E L+ +
Sbjct: 1028 KGRLENQLHELEQDLNRERQYKSELEQHKRKLLAELEDSKDHLAEKMGKVEELNNQLMKR 1087
Query: 705 EEEL 716
+EEL
Sbjct: 1088 DEEL 1091
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 3036 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 3087
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 3939 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 3990
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 4893 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 4944
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 5796 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 5847
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 6699 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 6750
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 561 EELFAKTDEVKALESRKNKLLEMLNQQAEEKGKRAERLENLDQDIKMFEEEL 716
+EL AK E KAL + + + N A++K K + + NL+ +K E ++
Sbjct: 7602 DELSAKVVEAKALIPKIEEAAKNENLPADDKPKAEQLVSNLEAFVKDVETQV 7653
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,684,407
Number of Sequences: 27780
Number of extensions: 286958
Number of successful extensions: 835
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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