Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A05
(898 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 31 0.17
SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit Pa... 30 0.39
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 29 0.68
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 1.2
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.6
SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.6
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 28 2.1
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 28 2.1
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 28 2.1
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 27 2.7
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 27 3.6
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 27 3.6
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 27 4.8
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 27 4.8
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 26 6.3
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 6.3
SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces pom... 26 6.3
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 26 6.3
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 26 6.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 8.4
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 8.4
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 145 KSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRPSYSDVLAKNTKNVNTIDTN 309
+ST+I+ + EN P S KK++++ +KP+ PS L ID N
Sbjct: 579 QSTLIQAPNSDDEENVP--SPSPKKKVVSPIKPLSPSRRPPLTSLYSGTTDIDIN 631
>SPAC6F12.12 |par2|pbp2|protein phosphatase regulatory subunit
Par2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 627
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 280 TKNVNTIDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDNKPKTDKKQTTTLSSG 456
T +V DT+ K + + K +K KH++ ++ E ++ K TT L+SG
Sbjct: 40 TDDVKHTDTHHSSKHELKKLKSHFLKDTLKHKRNHHANSNNEKHENSDKKIHTTVLASG 98
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.5 bits (63), Expect = 0.68
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +1
Query: 241 PMRPSYSDVLAKNTKNVNTIDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDNKPK 420
P+ SY ++ T + + T KS T +K + K N+K E S P
Sbjct: 168 PLGKSYRPKASRTTSSQSVAST--MTKSSTKTSKKKSSKKNSKSESNQDSSNDRSSTAPS 225
Query: 421 TDKKQTTTLSSGQ 459
T + LSS Q
Sbjct: 226 TAESNNEHLSSSQ 238
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +1
Query: 262 DVLAKNTKNVNTIDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDNKPKTDKKQ 435
D+L K+ ++T++K++ +T ETKP + K E + K+ +++K K + K+
Sbjct: 125 DILKVKEKSEKPLETSQKVEIETVETKPG--EPEVKQETNLQ--KEKKESKVKLESKE 178
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.6
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Frame = +1
Query: 88 LNHPDASHLNI--PSNPIIETKSTIIKPESPKRNENSPLADTSNKKRII-AEVKPMRPSY 258
LN + +L I NP++ + P+ RN+ SPL T N + E KP+ P
Sbjct: 678 LNTAQSENLPIYEQENPLLFDSLSWHVPKDDTRNDKSPLVPTWNADMMFEEEQKPIVP-- 735
Query: 259 SDVLAKNTKNVNTIDTNRK---IKSQTPETKPTNIKTNAKHE 375
D+ + V+++ TN + + S +N TN +E
Sbjct: 736 IDLSSMQDDQVSSLTTNEEFDPLSSFQASHSGSNFWTNMMNE 777
>SPBP4H10.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 308
Score = 28.3 bits (60), Expect = 1.6
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 10 PYRLPL*GIP*DFQINYTPLLARTILLNHPDASHLNIPSNPIIETKSTIIKPE-SPKRNE 186
P R+P G+ D + TPL T LNHP S N P ++ IK + SP +
Sbjct: 184 PLRIPTTGVSLD-SADLTPLSVSTSHLNHPSTS--NSPDPLYSASQPPSIKTDASPVDIK 240
Query: 187 NSPLADTSNKKRIIAE 234
N A+ K ++ E
Sbjct: 241 NMDAAEKLKKIDLLLE 256
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 64 PLLARTILLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVK 240
PL++ + + P L IP ++ETK + + N++ L D KKR+ E K
Sbjct: 63 PLISLNLPVQGPPTEELIIPPEEMLETKEEESLKHAREENDDLHL-DKETKKRLKKEKK 120
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 298 IDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDN 411
++ + K T ++KTN++HE +GK+Y D+
Sbjct: 27 VEADSKPNDLTAANSIVDLKTNSQHENANAAGKEYGDS 64
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 181 NENSPLADTSNKKRIIAEVKPMRPSYSDVLAKNTKNVNTIDTNRKIKSQTPETKPTNIKT 360
N +SP S++K A + + ++DVL NV +N SQ +
Sbjct: 629 NTHSPSRSISSEKSYKAAERGQQDKHNDVLVDLNPNVEAEKSNPHSNSQKTSKNDMSRNQ 688
Query: 361 NAKHEKPVYSGK 396
K+ K + +G+
Sbjct: 689 RNKYAKEIMTGQ 700
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 27.5 bits (58), Expect = 2.7
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 76 RTILLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAE---VKPM 246
R+ L P++S ++P + I STI S KRNE+S L+++ + II E
Sbjct: 352 RSCRLTKPESS--SVPPSSSISRSSTIHSCTSSKRNEDS-LSESDFEPDIIEEEDDSDEF 408
Query: 247 RPSYSDVLAKNTKN 288
PS S AK T +
Sbjct: 409 NPSVSRKKAKLTSS 422
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 398 NMKIISQKQTKNKRQHYLQGSESG--DHNTDDN 490
N+ S QT NK++H +E+ DH +DDN
Sbjct: 387 NVSSSSSSQTSNKKRHDHSYNETAAIDHKSDDN 419
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 181 NENSPLADTSNKKRIIAEVKPMRPSYSDVLAKNTKNVNTID 303
N NS + +K IA+ K MRPS +++K T + ID
Sbjct: 53 NSNSEFLEECSKYYTIAQGKQMRPSLVLLMSKATSLCHGID 93
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 121 PSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRPSYSDVLAKNTKNVN 294
PSN S I+KP P N S + + N + AE + P+ + +NVN
Sbjct: 235 PSNQDSSLNSNIVKPPLPPSNVQSNSSSSENVPKPNAETQEDLPTIDAHESSLYENVN 292
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 26.6 bits (56), Expect = 4.8
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 58 YTPLLARTILLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTS 210
YT L+ T + S L I S P+I T ++I KP +N+ S
Sbjct: 70 YTTLITITNSQCTGNYSTLTISSQPLIHTNTSISKPSQTATPQNTNTTQVS 120
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +1
Query: 73 ARTILLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRP 252
++ +L++ + + ++ SNP + + + K ESP N+ + S+K+ P+ P
Sbjct: 251 SKGMLMSMSTSENHSLSSNPELSNSNLLAKNESPADVSNNESGNESSKEPDKEHSTPIHP 310
Query: 253 S 255
+
Sbjct: 311 T 311
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 217 KRIIAEVKPMRPSYSDVLAKNTKNVNTIDTNRKIKS 324
K I V +RP + LA N +++ D N+++KS
Sbjct: 682 KSFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVKS 717
>SPBC405.02c ||SPBC4C3.01|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 88 LNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRPSYS 261
L+H A L +P+ P I S KP P +N + ++++ + + + YS
Sbjct: 194 LDHIPAEPLPLPARPQISDLSFFRKPSLPSALQNIVIEKNASQRSVSEPLHNLSSRYS 251
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 55 NYTPLLARTILLNHPDASHLNIPSNPIIETKSTIIKPESPKRNENSP 195
N +P+ RT L + S L+ PSNPI+ + S P++ + SP
Sbjct: 495 NSSPVQTRTSLFS----SRLSKPSNPIVSSVSQANAPKNALHSMPSP 537
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 109 HLNIPSNPIIETKSTIIKPESPKRNENSPLADTSNKKRIIAEVKPMRPSYSDVLAKN 279
HL++ + + K + +P+R L++TS KK AE + + A+N
Sbjct: 139 HLSVYQDEKVVEKENLFTSPAPERLTFQLLSNTSEKKTATAEENAFKVGLIEAAAQN 195
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 160 KPESPKRNENSPLADTSNKKRIIAEVKPMRPS-YSDVLAKNTKNV 291
KPE+P R +P+ + +K+ E K S + + A+ T N+
Sbjct: 975 KPEAPSRPRTAPIPEPEEQKKAPVEKKDAEKSVQAPIPAQPTGNI 1019
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 283 KNVNTIDTNRKIKSQTPETKPTNIKTNAKHEKPVYSGKQYEDNKPK 420
++ N + + S + + PTN+ T ++ + V +DNK K
Sbjct: 349 RSENVLQNDNHHSSLSMDNDPTNVSTKNRNNQTVGEHPYVDDNKKK 394
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,134,333
Number of Sequences: 5004
Number of extensions: 59829
Number of successful extensions: 263
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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