Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_A01
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 236 3e-63
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 123 3e-29
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 121 1e-28
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 117 2e-27
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 115 7e-27
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 114 2e-26
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 102 7e-23
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 98 1e-21
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 2e-13
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 68 1e-12
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 64 2e-11
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 62 1e-10
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 61 2e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 57 3e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 57 3e-09
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 56 5e-09
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 55 1e-08
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 53 4e-08
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 38 0.001
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 36 0.007
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 33 0.038
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 27 3.3
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.3
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 5.8
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.8
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 7.6
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 236 bits (577), Expect = 3e-63
Identities = 112/131 (85%), Positives = 120/131 (91%)
Frame = +3
Query: 204 LSFSXEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 383
L F EQSVGKTSLITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF
Sbjct: 14 LVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERF 73
Query: 384 RSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQ 563
RSLIPSYIRDS+VA++VYDITN NSF T KWI+DVR ERG DVII+LVGNKTDL+DKRQ
Sbjct: 74 RSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQ 133
Query: 564 VSTEEGDKKAK 596
V+ EEG+KKAK
Sbjct: 134 VTQEEGEKKAK 144
Score = 49.6 bits (113), Expect = 5e-07
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +1
Query: 601 LNVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENK 708
L +M +ETSAKAG+NVK LFR++A LPGM++ E +
Sbjct: 146 LKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQ 181
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 123 bits (297), Expect = 3e-29
Identities = 57/145 (39%), Positives = 96/145 (66%), Gaps = 1/145 (0%)
Frame = +3
Query: 183 ILYANSSLSFSXEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLW 359
++ N L + +VGK+SL+ RF+ D FD+ ++TIG FL++T+ +++ T V+L++W
Sbjct: 10 VVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIW 69
Query: 360 DTAGQERFRSLIPSYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNK 539
DTAGQER++SL P Y R++ A+VVYDIT A S + WI +++ + ++I L GNK
Sbjct: 70 DTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNK 129
Query: 540 TDLSDKRQVSTEEGDKKAKXTERDV 614
DL+ +R+ + E+ D +A E ++
Sbjct: 130 LDLAQERR-AVEKADAEAYAAEANL 153
Score = 35.5 bits (78), Expect = 0.009
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 604 NVMFIETSAKAGYNVKQLFRRVAAALPGMDSAENKPPEDMHXG-DLEDNRPA 756
N++F ETSAK NV +LF +A LP ++ N+ ++ G +L + RPA
Sbjct: 152 NLLFFETSAKTAENVNELFTAIAKKLP-LEDKLNQARGAVNRGVNLSEARPA 202
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 121 bits (292), Expect = 1e-28
Identities = 51/120 (42%), Positives = 85/120 (70%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
+ VGK++L+ RF + F+ ++TIG++F ++ + L+++ ++ Q+WDTAGQER+R++
Sbjct: 18 DSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITS 77
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEE 578
+Y R + A++VYDIT +SF +W+ ++R S+++IMLVGNKTDL R VSTEE
Sbjct: 78 AYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEE 137
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 117 bits (281), Expect = 2e-27
Identities = 52/120 (43%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYL----EDRTVRLQLWDTAGQERFRSLIP 398
GK+ L+ RF+ + +D+ T+GIDF S+ + + + + ++LQ+WDTAGQE+FRS+
Sbjct: 21 GKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVAR 80
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEE 578
+Y R + AV+VYD+TN +SF + S W+ D+R S + ++L G+K+DL ++RQVSTEE
Sbjct: 81 NYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEE 140
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 115 bits (277), Expect = 7e-27
Identities = 52/125 (41%), Positives = 79/125 (63%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
+ VGK+ L+ RF DSF ++ TIGIDF +T+ L+ + ++LQ+WDTAGQERFR++
Sbjct: 17 DSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITT 76
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTEE 578
+Y R + +++YD+T+ SF W +V +V +L+GNK D D+RQVS E+
Sbjct: 77 AYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQ 136
Query: 579 GDKKA 593
G A
Sbjct: 137 GQALA 141
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 601 LNVMFIETSAKAGYNVKQLFRRVAAALPGMD-SAENKPPEDMHXGDLEDNR 750
L V F+E SAK NV + F +A + AEN+ + DL ++R
Sbjct: 144 LGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQANNVDLGNDR 194
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 114 bits (274), Expect = 2e-26
Identities = 50/116 (43%), Positives = 79/116 (68%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
+ VGK+ L+ RF D++ +Y +TIG+DF +T LE +TV+LQ+WDTAGQERFR++
Sbjct: 16 DSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITS 75
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 566
SY R + ++VYD+T+ +SF+ +W+ ++ V +LVGNK+D+ DK+ V
Sbjct: 76 SYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVV 131
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 601 LNVMFIETSAKAGYNVKQLF 660
LN+ F+ETSAK NV+Q F
Sbjct: 143 LNIPFLETSAKDSTNVEQAF 162
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 102 bits (244), Expect = 7e-23
Identities = 51/122 (41%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
E VGKTS++ +++ F Y+ATIG DFL+K + ++D+ V LQLWDTAGQERF+SL
Sbjct: 16 ESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGV 75
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG----SDVIIMLVGNKTDLSD-KRQ 563
++ R + V+VYD+ N+ SF W D+ + +L+GNK D+ + KR
Sbjct: 76 AFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRM 135
Query: 564 VS 569
VS
Sbjct: 136 VS 137
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 98.3 bits (234), Expect = 1e-21
Identities = 49/121 (40%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
+ VGKT L+ +F+ F Y+ATIG DFL+K + ++D+ V LQLWDTAGQERF+SL
Sbjct: 16 DSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGM 75
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI---IMLVGNKTDL-SDKRQV 566
++ R + V+VY++ N+ SF W + + D ++VGN+ D + KR V
Sbjct: 76 AFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAV 135
Query: 567 S 569
S
Sbjct: 136 S 136
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 70.9 bits (166), Expect = 2e-13
Identities = 30/109 (27%), Positives = 59/109 (54%)
Frame = +3
Query: 219 EQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIP 398
+ S+GKTSL+ ++ SFD T+G++F+ KT+ + + + +WD GQ F +++P
Sbjct: 18 DSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVNMLP 77
Query: 399 SYIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTD 545
D+ + ++D++ ++ + +W R + V I L+G K D
Sbjct: 78 MVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPI-LIGTKYD 125
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 68.1 bits (159), Expect = 1e-12
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +3
Query: 228 VGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYI 407
VGK++L + + F + Y TI D K ++ L + DTAGQE + ++ Y+
Sbjct: 19 VGKSALTIQLIQSHFVDEYDPTIE-DSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYM 77
Query: 408 RDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVI-IMLVGNKTDLSDKRQVSTEEGD 584
R ++VY+IT+ +SF + S + + + D ++LV NK DL +R VS EG+
Sbjct: 78 RTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGE 137
Query: 585 KKAK 596
+ AK
Sbjct: 138 QLAK 141
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 64.1 bits (149), Expect = 2e-11
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +3
Query: 222 QSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPS 401
+SVGK+SL +++ + F +Y TI F SK + + + ++ DTAGQ+ + L
Sbjct: 15 RSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIIDTAGQDEYSILNSK 73
Query: 402 YIRDSTVAVVVYDITNANSFHQTSKWIDDVRTERGSD-VIIMLVGNKTDLSDKRQVSTEE 578
+ V+VY IT+ +SF D + G++ V I++VGNK+DL +R V+ EE
Sbjct: 74 HSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAVTAEE 133
Query: 579 G 581
G
Sbjct: 134 G 134
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 61.7 bits (143), Expect = 1e-10
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 410
GKTSL++ F F Y T+ +++S ++ ++V+L LWDTAGQE + L P
Sbjct: 20 GKTSLLSVFTLGYFPTEYVPTVFENYVSDCR-VDGKSVQLALWDTAGQEEYERLRPMSYA 78
Query: 411 DSTVAVVVYDITNANSFHQTS-KWIDDVRTERGSDVIIMLVGNKTDL 548
+ + +V + I + +S S KWI+++ T +V +LVG K DL
Sbjct: 79 KAHIILVGFAIDSPDSLENVSTKWIEEINT-LCPNVPFILVGMKADL 124
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 61.3 bits (142), Expect = 2e-10
Identities = 28/110 (25%), Positives = 55/110 (50%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 410
GKT+ + R + F+ Y AT+G++ + + +WDTAGQE+ L Y
Sbjct: 21 GKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDGYYI 80
Query: 411 DSTVAVVVYDITNANSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKR 560
++++D+T+ ++ W D+ ++ I+L GNK D+ +++
Sbjct: 81 QGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKERK 129
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 57.2 bits (132), Expect = 3e-09
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 410
GKT L+ F +F Y T+ ++++ + ++ R + L LWDTAGQE + L P
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHIELALWDTAGQEDYDRLRPLSYP 76
Query: 411 DSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL 548
DS V ++ + + S KWI +V S++ I+LVG K DL
Sbjct: 77 DSHVVLICFSVDAPESLDNVQEKWISEV-LHFCSNLPILLVGCKVDL 122
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 57.2 bits (132), Expect = 3e-09
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +3
Query: 225 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 404
+ GKTSL+ F F Y+ TI +++ ++++ ++ L LWDTAGQE + L
Sbjct: 23 AAGKTSLLNVFTKGYFPQVYEPTIFENYIHD-IFVDGNSIELSLWDTAGQEEYDQLRSLS 81
Query: 405 IRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDL--SDKRQV 566
D+ V ++ + + + +S +KW+ +V + V ++LV K DL +D+ QV
Sbjct: 82 YSDTHVIMICFAVDSRDSLENVITKWLPEV-SSNCPGVKLVLVALKCDLRGADEEQV 137
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 56.4 bits (130), Expect = 5e-09
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 410
GKT L+ F +F Y T+ ++++ + ++ R V L LWDTAGQE + L P
Sbjct: 18 GKTCLLIVFSKGTFPEVYVPTVFENYVAD-VEVDGRHVELALWDTAGQEDYDRLRPLSYP 76
Query: 411 DSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVSTE 575
DS V ++ + + + +S KWI +V S + I+LV K DL + ++ E
Sbjct: 77 DSHVILICFAVDSPDSLDNVQEKWISEV-LHFCSSLPILLVACKADLRNDPKIIEE 131
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 54.8 bits (126), Expect = 1e-08
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Frame = +3
Query: 225 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 404
+VGKT L+ + + F + Y T+ D + T+ + D L L+DTAGQE + L P
Sbjct: 13 AVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLS 71
Query: 405 IRDSTVAVVVYDITNANSFHQT-SKWIDDVRTERGSDVIIMLVGNKTDLSDKRQV 566
+ V +V + +T+ SF KW +V V ++VG + DL D V
Sbjct: 72 YPQTDVFLVCFSVTSPASFENVKEKWFPEVH-HHCPGVPCLIVGTQIDLRDDPSV 125
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 53.2 bits (122), Expect = 4e-08
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +3
Query: 231 GKTSLITRFMYDSFDNTYQATIGIDFLSKTMY-LEDRTVRLQLWDTAGQERFRSLIPSYI 407
GKT L+ F +F Y T+ ++++ Y + + L LWDTAGQE + L P
Sbjct: 26 GKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSY 85
Query: 408 RDSTVAVVVYDITNANSFHQ-TSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVS 569
+S V ++ + I S + T KW +V+ I+LVG K DL R +
Sbjct: 86 PNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRKDRNAT 139
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 38.3 bits (85), Expect = 0.001
Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +3
Query: 225 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 404
+ GKT+++ + + T T+G + + T + ++ +WD GQ++ R L Y
Sbjct: 31 AAGKTTILYKLKLNQSVVTIP-TVGFNVETVTY----KNIKFNVWDVGGQDKIRPLWRHY 85
Query: 405 IRDSTVAVVVYDITNANSFHQTSKWIDDVRTERG-SDVIIMLVGNKTDL 548
+ + V D ++N + + + + ++R D +++++ NK DL
Sbjct: 86 FTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 35.9 bits (79), Expect = 0.007
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 225 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 404
+ GKT+++ + T TIG + + +E R + +WD GQ++ R L Y
Sbjct: 27 AAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYRNISFTVWDVGGQDKIRPLWRHY 81
Query: 405 IRDSTVAVVVYDITNANSFHQTSKWIDDVRTE-RGSDVIIMLVGNKTDL 548
+++ + V D + + + + + E D ++++ NK DL
Sbjct: 82 FQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 33.5 bits (73), Expect = 0.038
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +3
Query: 225 SVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSY 404
+ GKT+++ + + N T G F +T+ +E +R +WD GQ+ R+ +Y
Sbjct: 26 NAGKTTILKCLLNEDV-NEVSPTFG--FQIRTLEVEG--LRFTIWDIGGQKTLRNFWKNY 80
Query: 405 IRDSTVAVVVYDITNANSFHQTSKWIDDVRT-ERGSDVIIMLVGNKTDLSDKRQVSTEEG 581
+ + V D + + + ++ E+ I+++ NK+D+S +S+EE
Sbjct: 81 FESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSG--ALSSEEI 138
Query: 582 DK 587
K
Sbjct: 139 SK 140
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = -1
Query: 451 ALVIS*TTTATVESLMYEGMRDRNRSWPAVSHSWSRTVRSSKYIVFDRKSIPI 293
+++I+ + T + G+ D + W ++++WS + K+I + SIP+
Sbjct: 7 SVIINPSVAHTATVIFLHGLGDSGQGWSFMANTWS-NFKHIKWIFPNAPSIPV 58
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 300 IDFLSKTMYLEDRTVRLQLWDTAGQE-RFRSLIPSYIRDSTVAVVVYDITN 449
I F + Y ED T + + +A + +F+SLI Y DST+A Y+ N
Sbjct: 27 ISFCTCKAYFEDNTSLSRRFFSAKKSLQFKSLIRKYSEDSTLAWRDYENYN 77
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 258 MYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVA 425
+Y FD+ Y + D+LS L ++ W+ + R +PSY S +A
Sbjct: 1167 LYSEFDSIYLNSSTSDYLSLNSILRVLQGKMVKWEQRFLDYQRLYLPSYKELSKIA 1222
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 5.8
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2
Query: 275 QYLSGNNWN 301
QYLSGNNWN
Sbjct: 1173 QYLSGNNWN 1181
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 483 DDVRTERGSDVIIMLVGNKTDLSDKRQVSTEEGD 584
+D E+GS+V + +VG +TD ++ ++T + D
Sbjct: 134 EDQVIEKGSNVRLKIVGTRTDATEIFAIATMKED 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,283,046
Number of Sequences: 5004
Number of extensions: 66102
Number of successful extensions: 209
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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