Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P24
(938 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 3e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-04
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 43 0.013
UniRef50_A0DE74 Cluster: Chromosome undetermined scaffold_47, wh... 40 0.12
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.37
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.37
UniRef50_A2DFS2 Cluster: XYPPX repeat family protein; n=3; Trich... 36 1.5
UniRef50_A2F5P4 Cluster: Putative uncharacterized protein; n=1; ... 36 2.0
UniRef50_Q0V3K7 Cluster: Putative uncharacterized protein; n=3; ... 36 2.0
UniRef50_Q499A1 Cluster: Zgc:110391; n=4; Danio rerio|Rep: Zgc:1... 34 6.0
UniRef50_A1ISN1 Cluster: DNA polymerase III tau and gamma chains... 34 6.0
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +2
Query: 668 TDSLRPVVRLRRAXSAHPKAVIRLSTESGDTAGXNM 775
TDSLR VVRLRRA SAH KAVIRLSTESGD AG NM
Sbjct: 24 TDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.8 bits (126), Expect = 3e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +3
Query: 597 CINESAXARGEAVCVLGALPLPRSLTRCARSFGCGERXQL-TQRR*YGYPPNQGIPQ 764
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 49.6 bits (113), Expect = 1e-04
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +3
Query: 621 RGEAVCVLGALPLPRSLTRCARSFGCGERXQLT 719
R +C G +PLPRSLTR ARSFGCGER +LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.7 bits (96), Expect = 0.013
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 400 DPDMIRYIDEFGQTTTXMQ 456
DPDMIRYIDEFGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A0DE74 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_47,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1429
Score = 39.5 bits (88), Expect = 0.12
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 744 PNQGIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKPDXTIKK 923
P Q P++ QK ++PEP K+P PK PP + P P ++ P I+K
Sbjct: 774 PKQDPPKKPDPPQKEIQKPEPPKKPEPKQDPPKKPEPPQKEIQKPEPPKKPEPPQKEIQK 833
Query: 924 P 926
P
Sbjct: 834 P 834
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 37.9 bits (84), Expect = 0.37
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 598 ALMNRPXRGERRFAYW 645
ALMNRP RGERRFAYW
Sbjct: 26 ALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.9 bits (84), Expect = 0.37
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 667 ERGSGRAPNTQTASPRAXADSLMQ 596
+R + APNTQTASPRA ADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A2DFS2 Cluster: XYPPX repeat family protein; n=3;
Trichomonas vaginalis G3|Rep: XYPPX repeat family
protein - Trichomonas vaginalis G3
Length = 496
Score = 35.9 bits (79), Expect = 1.5
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 738 YPPNQGIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKP 905
YPP QG P Q+G P+ P G +P P + PPP Q +A P
Sbjct: 425 YPPPQGYPNYQMPPQQGGYPPQQGGYPP-QGNYPPPQGYPPQQGGYPPPQQNYAAP 479
>UniRef50_A2F5P4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 437
Score = 35.5 bits (78), Expect = 2.0
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 735 GYPPNQG--IPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKP 905
GYPP QG P + G P P P +L +G APP + + PPP + P
Sbjct: 377 GYPPQQGGYPPPQQYAPPPGYNAPPPGYAPGYLPQ-QQGYAPPPQGYAAPPPGSQQPPP 434
>UniRef50_Q0V3K7 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 447
Score = 35.5 bits (78), Expect = 2.0
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 750 QGIPQEXTCDQKGXKRPEPVKRPXWLGG-FPKGXAPPDEHHXNPPPSQRWAKPDXTIKKP 926
QG P + Q+ + P +P + G +P PP+++ PPP Q+W P +P
Sbjct: 73 QGQPGQGYPGQQPTQGYPPPGQPQYSGAQYPPQQYPPNQYQQGPPPGQQWGAPQQQWGQP 132
>UniRef50_Q499A1 Cluster: Zgc:110391; n=4; Danio rerio|Rep:
Zgc:110391 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1196
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +3
Query: 756 IPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKPDXTIKKP 926
+P+E T + PE P + F + + P+E PP P T KKP
Sbjct: 791 LPEESTTQEPAQTEPELPSSPQEMPNFNESESKPEEDSSMPPTESDVGSPKMTAKKP 847
>UniRef50_A1ISN1 Cluster: DNA polymerase III tau and gamma chains;
n=4; Neisseria|Rep: DNA polymerase III tau and gamma
chains - Neisseria meningitidis serogroup A
Length = 709
Score = 33.9 bits (74), Expect = 6.0
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +3
Query: 744 PNQGIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKPDXTI 917
P Q P + + + P K P + GFP PP++ PPP A P T+
Sbjct: 493 PIQATPNDEAVETEAFAHEAPAK-PFYGYGFPDNDCPPEDGAEIPPPDWEHAAPADTV 549
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,025,280
Number of Sequences: 1657284
Number of extensions: 11862169
Number of successful extensions: 26073
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25902
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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