Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P24
         (938 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.     32   3.5  
BC128191-1|AAI28192.1|  183|Homo sapiens PRB4 protein protein.         31   6.0  

>AB020628-1|BAA74844.2| 1566|Homo sapiens KIAA0821 protein protein.
          Length = 1566

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 17/54 (31%), Positives = 20/54 (37%)
 Frame = +3

Query: 735 GYPPNQGIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRW 896
           G  P +G   E         R  P   P  + G   G A P E H  P P +RW
Sbjct: 6   GAGPGEGRDTEAALVPPPPTRFPPAPAPGDVPGGGPGFAEPQERHAGPTPERRW 59


>BC128191-1|AAI28192.1|  183|Homo sapiens PRB4 protein protein.
          Length = 183

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = +3

Query: 735 GYPPNQGIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQRWAKP 905
           G PP+ G P+          + +P   P   G  P+G  PP +    PPP     +P
Sbjct: 91  GPPPHPGKPERPPPQGGNQSQGKPQGPPQQEGNKPQGPPPPGKPQGPPPPGGNPQQP 147


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,788,283
Number of Sequences: 237096
Number of extensions: 2034053
Number of successful extensions: 7633
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7600
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)