Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P24
         (938 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004860-1|AAO45216.1|  437|Drosophila melanogaster RE27227p pro...    29   7.0  
AF170082-1|AAD47839.1|  419|Drosophila melanogaster cleavage sti...    29   7.0  
AE014297-2555|AAF55577.2|  419|Drosophila melanogaster CG7697-PA...    29   7.0  

>BT004860-1|AAO45216.1|  437|Drosophila melanogaster RE27227p
           protein.
          Length = 437

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +3

Query: 741 PPNQ--GIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQR 893
           PP Q  G+PQ          R  P+      G  P+  APP      PPP+Q+
Sbjct: 301 PPQQQQGVPQAPPAPYPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPPPTQQ 353


>AF170082-1|AAD47839.1|  419|Drosophila melanogaster cleavage
           stimulation factor 64kilodalton subunit protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +3

Query: 741 PPNQ--GIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQR 893
           PP Q  G+PQ          R  P+      G  P+  APP      PPP+Q+
Sbjct: 301 PPQQQQGVPQAPPAPYPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPPPTQQ 353


>AE014297-2555|AAF55577.2|  419|Drosophila melanogaster CG7697-PA
           protein.
          Length = 419

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +3

Query: 741 PPNQ--GIPQEXTCDQKGXKRPEPVKRPXWLGGFPKGXAPPDEHHXNPPPSQR 893
           PP Q  G+PQ          R  P+      G  P+  APP      PPP+Q+
Sbjct: 301 PPQQQQGVPQAPPAPYPSDPRQRPMDPRLRAGPGPQQQAPPQGIPQAPPPTQQ 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,801,340
Number of Sequences: 53049
Number of extensions: 592261
Number of successful extensions: 1337
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4648779081
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)