Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P22
(944 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 82 5e-16
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 82 5e-16
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 81 9e-16
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 81 9e-16
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 81 9e-16
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 32 0.69
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein. 31 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.6
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 30 2.1
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 30 2.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 3.7
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 3.7
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 4.8
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 29 4.8
U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like pr... 29 6.4
AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentapleg... 29 6.4
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 113 bits (273), Expect = 1e-25
Identities = 56/76 (73%), Positives = 59/76 (77%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
MLIKVKTLTGKEIE+DIEP D GIPP QQRLIF+GKQMND+KTA DYK
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 349 VQGGSVLHLVLALRGG 396
V GGSVLHLVLALRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 82.2 bits (194), Expect = 5e-16
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 349 VQGGSVLHLVLALRGGE 399
+Q S LHLVL LRGG+
Sbjct: 821 IQKESTLHLVLRLRGGD 837
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
Score = 79.0 bits (186), Expect = 5e-15
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTL GK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 82.2 bits (194), Expect = 5e-16
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 349 VQGGSVLHLVLALRGGE 399
+Q S LHLVL LRGG+
Sbjct: 821 IQKQSTLHLVLRLRGGD 837
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 745 IQKESTLHLVLRLRGG 760
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 79.0 bits (186), Expect = 5e-15
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTL GK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSG 309
M I VKTLTGK I +++E +D GIPP QQRLIF+G
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 81.4 bits (192), Expect = 9e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 348
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 349 VQGGSVLHLVLALRGG 396
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 55.2 bits (127), Expect = 6e-08
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +1
Query: 166 KMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDY 345
K+ + VKTL GK I I I+ TD G+PP QQRLIF Q+ +++ Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 346 KVQGGSVLHLV 378
++ ++HLV
Sbjct: 220 NIRDEDIIHLV 230
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-2|CAD44155.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-3|CAD44115.1| 484|Caenorhabditis elegans Hypothetical
protein F15C11.2b protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 283 QQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVL 381
+Q +I++GK + DE+T +K+ G +HLV+
Sbjct: 46 EQVCIIYTGKILKDEETLTQHKIADGHTVHLVI 78
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 643 GGXXPXXXFFXLGXPXPPP-XGXXPPPP 563
GG P F G P PPP G PPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>AF074395-1|AAC26791.1| 365|Caenorhabditis elegans CET-1 protein.
Length = 365
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +3
Query: 213 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 317
R + RQ+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSRQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 786 GGGGGFFXXXXXPPPXGXGXFFFXPXPXXPXKXXXXXXXGGXXXPP 923
G GGG PPP G G F P P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +3
Query: 786 GGGGGFFXXXXXPPPXGXGXFFFXPXPXXPXKXXXXXXXGGXXXPP 923
G GGG PPP G G F P P P PP
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPP 697
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +1
Query: 172 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 351
++ VKTL + + +++ + GIP ++QRL ++G+Q+ D D +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 352 QGGSVLHLVLALRGG 396
+ +++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +1
Query: 172 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 351
++ VKTL + + +++ + GIP ++QRL ++G+Q+ D D +
Sbjct: 1 MVFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGI 55
Query: 352 QGGSVLHLVLALRGG 396
+ +++ L L GG
Sbjct: 56 DSEATIYVNLELLGG 70
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 788 GIPPPPPLGIIPPPP 802
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 3.7
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 765 FFXPXXGGGGGGFFXXXXXPPPXGXGXFFFXPXPXXPXKXXXXXXXGGXXXPP 923
F P GGGG G P P G G P P GG PP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPP 69
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 270 GSPPPPPTGSPPPPP 284
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 278 GSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 291 GSPPPPPTGSPPPPP 305
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 299 GSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 276 GSPPPPPTGSPPPPP 290
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 284 GSPPPPPAGGSPPPP 298
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 607 GXPXPPPXGXXPPPP 563
G P PPP G PPPP
Sbjct: 788 GIPPPPPLGIIPPPP 802
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 619 FFXLGXPXPPPXGXXPPPP 563
FF L P PPP PPPP
Sbjct: 780 FFALPVPPPPPVPPPPPPP 798
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 169 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIP 279
M I VKTLTGK I +++E +D GIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U64856-2|AAB04986.2| 365|Caenorhabditis elegans Dpp/bmp-like
protein 1 protein.
Length = 365
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 213 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 317
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
>AF004395-1|AAC27729.1| 365|Caenorhabditis elegans decapentaplegic
protein homolog protein.
Length = 365
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 213 RYRTHRQSGKNQRKSRRKGR-HSAAATASHIFRKTN 317
R + Q+G ++RK+R+KGR H S++ R+T+
Sbjct: 233 RRKRSAQTGNSERKNRKKGRKHHNTEAESNLCRRTD 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,753
Number of Sequences: 27780
Number of extensions: 308087
Number of successful extensions: 2609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2265
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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