Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P19
(1267 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.001
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.021
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.048
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.084
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.45
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 27 5.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.5
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 7.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 7.3
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 9.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.6
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 26 9.6
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 9.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 0.001
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXX 1199
PP PP PP P + P PP P PTP P P P +PP
Sbjct: 1189 PPVPPPSEAPPVP-KPSVGVPPVPPPSTA----PPVPTPSAGL--PPVPVPTAKAPPVPA 1241
Query: 1200 PXEXXXXXSTPRGXPP 1247
P STPR P
Sbjct: 1242 PSSEAPSVSTPRSSVP 1257
Score = 35.1 bits (77), Expect = 0.021
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXT---PTPGPXXXGPRXPXPXETSPP 1190
PP P PP P P AP P P P P P P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 1191 PXXPXEXXXXXSTPRGXPP 1247
P E G PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPP 1209
Score = 32.3 bits (70), Expect = 0.15
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 7/83 (8%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPX-RXHXXXPXTPTPG-----PXXXG-PRXPXPXE 1178
PP P PP P + AP PP P P P P G P P P
Sbjct: 1041 PPVPIPTSTPPVP-KSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 1179 TSPPPXXPXEXXXXXSTPRGXPP 1247
+PP P P G PP
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 31.5 bits (68), Expect = 0.26
Identities = 22/76 (28%), Positives = 23/76 (30%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXX 1199
P P P PP P P AP P P P P P P +PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSG-------APPVPKPSVAAPPVPVP-SGAPPVPK 1144
Query: 1200 PXEXXXXXSTPRGXPP 1247
P P G PP
Sbjct: 1145 PSVAAPPVPAPSGAPP 1160
Score = 30.3 bits (65), Expect = 0.59
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 4/80 (5%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXT---PTPGPXXXGPRXPXPXETSPP 1190
PP P PP P P P P P P P P P P +PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP-SGAPPVPKPSVAAPP 1170
Query: 1191 PXXPXEXXXXXSTP-RGXPP 1247
P P G PP
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPP 1190
Score = 30.3 bits (65), Expect = 0.59
Identities = 21/79 (26%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXT---PTPGPXXXGPRXPXPXETSPP 1190
P P P PP P P P P + P P P P P P T+PP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVP-PPSTAPP 1218
Query: 1191 PXXPXEXXXXXSTPRGXPP 1247
P P P
Sbjct: 1219 VPTPSAGLPPVPVPTAKAP 1237
Score = 29.5 bits (63), Expect = 1.0
Identities = 23/85 (27%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAP----PXRXHXXXPXTPTPGPXXXGPRXPXPXETSP 1187
PP P PP P P AP P P P P P P P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPSEAPPVPKPSVGVP 1208
Query: 1188 PPXXPXEXXXXXSTPRGXPPXXXXT 1262
P P + G PP T
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPT 1233
Score = 28.7 bits (61), Expect = 1.8
Identities = 21/85 (24%), Positives = 23/85 (27%), Gaps = 5/85 (5%)
Frame = +3
Query: 1023 PPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXP-----XTPTPGPXXXGPRXPXPXETSP 1187
P P PPP P +P PP P T P P P +P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 1188 PPXXPXEXXXXXSTPRGXPPXXXXT 1262
P P P PP T
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPT 1047
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
Frame = +1
Query: 505 PXPPHTXAPPXP-PXXGAXPPPP 570
P PP + APP P P G P PP
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXX 1199
P P P PP P P APP P P P P +S P
Sbjct: 1023 PVPLPSADAPPIP------VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI 1076
Query: 1200 P-XEXXXXXSTPRGXPP 1247
P P G PP
Sbjct: 1077 PAPSGAPPVPAPSGIPP 1093
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/75 (25%), Positives = 21/75 (28%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXX 1199
P P P P AP P P P P P P P T+PP
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVP-STAPPVPI 1045
Query: 1200 PXEXXXXXSTPRGXP 1244
P + G P
Sbjct: 1046 PTSTPPVPKSSSGAP 1060
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +1
Query: 505 PXPPHTXAPPXPPXXGAXPPPP 570
P PP + APP P PP P
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 7.3
Identities = 19/78 (24%), Positives = 19/78 (24%), Gaps = 2/78 (2%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPG--PXXXGPRXPXPXETSPPP 1193
P P P PP P P P P P P P P P PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 1194 XXPXEXXXXXSTPRGXPP 1247
P P P
Sbjct: 1230 PVPTAKAPPVPAPSSEAP 1247
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXXGAXPPP 567
PP P P APP P GA P P
Sbjct: 1140 PPVPKPS-VAAPPVPAPSGAPPVP 1162
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.021
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPP 1193
PPPPP P P AP PP P P P P G P P PPP
Sbjct: 732 PPPPPPAVIVPTPA----PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 499 PXPXPPHTXAPPXPPXXGAXPPPPRAP 579
P P P PP P G PPPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.45
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPXPPXAPXAGPPPXXPP 903
P P PP AGPPP PP
Sbjct: 763 PPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.59
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXX-GAXPPPPRAP 579
PP P PP PP GA PPPP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.9 bits (64), Expect = 0.78
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPXPPXAPXAGPPPXXPP 903
P P PP AP G PP PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 2.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +3
Query: 1089 APPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXXPXEXXXXXSTPRGXPP 1247
+PP TP P P P P P PPP P P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPP--PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 994 PPPAXGXXARRRXPXXSHPXPPAAXXXXPPPXPP 1095
PPP P PPA PPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.048
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXA-PPXRXHXXXPXTPTPG 1139
PPPPP PPP P A PP P P PG
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXXGAXPPPPRAP 579
P PP AP PP + PPPP AP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 31.5 bits (68), Expect = 0.26
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXXGAXPPPP 570
PP PP APP P + PPPP
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Frame = +3
Query: 1047 PPXPGRXXXXAPXXAPPXRXHXXXPXTP-TPGPXXXGPRXPXPXETSPPP 1193
P PG AP PP H P P PG P P P P
Sbjct: 1433 PTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAP-APSSAPAPPAP 1481
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 499 PXPXPPHTXAPPXPPXXGAXPPPPRAP 579
P P PP PP P PP AP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 33.1 bits (72), Expect = 0.084
Identities = 19/75 (25%), Positives = 22/75 (29%)
Frame = +3
Query: 1023 PPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXXP 1202
PPP PP P + P PP +P P P P + PPP
Sbjct: 150 PPPSPASAPPIPSKAPPI-PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQ 208
Query: 1203 XEXXXXXSTPRGXPP 1247
S P P
Sbjct: 209 APVANTSSRPSSFAP 223
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 487 EXXPPXPXPPHTXAPPXPPXXGAXPPPPRAP 579
E PP PP PP P A P P +AP
Sbjct: 136 ELRPPTSAPPRPSIPP-PSPASAPPIPSKAP 165
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = +3
Query: 1020 PPPPPXXXPPP---XPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPP 1190
PP PP PPP P P P H + +P GP P S P
Sbjct: 195 PPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIP---SASVP 251
Query: 1191 PXXP 1202
P P
Sbjct: 252 PVPP 255
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.45
Identities = 23/81 (28%), Positives = 23/81 (28%), Gaps = 6/81 (7%)
Frame = +3
Query: 1023 PPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXP------XPXETS 1184
PP PPP P R PP P P P G P TS
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 1185 PPPXXPXEXXXXXSTPRGXPP 1247
PP P S P PP
Sbjct: 414 TPP-VPTPPSLPPSAPPSLPP 433
Score = 30.3 bits (65), Expect = 0.59
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +1
Query: 496 PPXPXPPHTXAP---PXPPXXGAXPPPP 570
PP P PP + A P PP + PPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 29.5 bits (63), Expect = 1.0
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = +3
Query: 1023 PPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXXP 1202
PP P PP PGR AP PP P P P P P S PP P
Sbjct: 388 PPAP---PPAIPGR---SAP-ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Query: 1203 XEXXXXXSTPRGXP 1244
P P
Sbjct: 441 MGAPAAPPLPPSAP 454
Score = 29.1 bits (62), Expect = 1.4
Identities = 18/62 (29%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Frame = +3
Query: 1020 PPPPPXXXPPPX-PGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPX 1196
PP P PP P P PP P P P P TS PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 1197 XP 1202
P
Sbjct: 293 PP 294
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +3
Query: 1044 PPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPPXXPXEXXXXX 1223
PPP P R P P P P G P S PP P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR--SAP 370
Query: 1224 STPRGXPP 1247
ST R PP
Sbjct: 371 STGRQPPP 378
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 1029 PPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPP 1190
PP PP P P APP P P P P +PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXXGAXPP-PPRAP 579
PP P P APP P A PP PP AP
Sbjct: 447 PPLP-PSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 511 PPHTXAPPXPPXXGAXPPPPRAP 579
P T APP PP + PP R P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVP 246
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 1020 PPPPPXXXPPPXPGRXXXXAPXXAPPXRXHXXXPXTPTPGPXXXGPRXPXPXETSPPP 1193
PP P PP P AP P P P P P P P +PPP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAP--PLPAGMPAAPPLP-PAAPAPPP 478
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 511 PPHTXAPPXPPXXGAXPPPPRA 576
PP T APP P PPP A
Sbjct: 27 PPRTMAPPPAPSRVQQAPPPTA 48
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 496 PPXPXPPHTXAPPXPPXXGAXPPPP 570
PP P PP PP P PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPP---PPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 569 GGGGXAPXXGGXGGAXVWGGXG 504
G GG P GG GG +GG G
Sbjct: 196 GSGGPPPGPGGFGGFGGFGGEG 217
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = -1
Query: 1141 GP-GVGVXGXXXWXRXGGAXXGAXXXXRPGXGGGXXXGGGGG 1019
GP G G G R GG+ G R G GGG G GGG
Sbjct: 133 GPAGRGGRGGFRGGR-GGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 9.6
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
Frame = +1
Query: 106 G*HRPTP----DPGXG--GAPRHXXHXXH--PPPXHRXXXXHPPPTPXR 228
G H P P +PG P H H PPP H H PP P +
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFK 343
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 9.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 1044 PPPXPGRXXXXAPXXAPPXRXH 1109
PPP P R P APP H
Sbjct: 759 PPPQPARPESTRPALAPPSSSH 780
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 26.2 bits (55), Expect = 9.6
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +1
Query: 994 PPPAXGXXARRRXPXXSHPXPPAAXXXXPPPXPP 1095
PPP R +P PP + PPP P
Sbjct: 79 PPPYTAEPEARYNSTIHNPMPPMSQAYRPPPTEP 112
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 578 GARGGG--GXAPXXGGXGGAXVWGGXGXGG 495
GARGGG G GG GGA G GG
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.146 0.534
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,056,102
Number of Sequences: 5004
Number of extensions: 29462
Number of successful extensions: 261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 687563588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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