Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P16
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0272 + 15189617-15190276,15190361-15191107                       29   4.0  
07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266,850...    29   5.3  

>08_02_0272 + 15189617-15190276,15190361-15191107
          Length = 468

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 199 PDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGL 306
           P+  DD   N+    V+++PDP  +RG G + +  L
Sbjct: 218 PEASDDAINNMVLSFVSMIPDPPAMRGGGGLALHPL 253


>07_01_1004 +
           8500584-8501881,8502194-8502402,8503024-8503266,
           8503381-8503697,8503891-8504250
          Length = 808

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 262 PIVVRGAGNMTVFGLS-NRFNGEFPSGLQSRVAPEEYQATI 381
           P+ V     + V GLS N F GE PSG+     P+  Q TI
Sbjct: 236 PVAVMNMSGLAVLGLSTNGFTGELPSGI-GGFLPKLRQLTI 275


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,898,659
Number of Sequences: 37544
Number of extensions: 387245
Number of successful extensions: 758
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)