Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P16
(935 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034691-1|AAH34691.1| 165|Homo sapiens cysteine-rich hydrophob... 212 2e-54
AF159423-1|AAD55981.1| 165|Homo sapiens cysteine-rich hydrophob... 212 2e-54
BC127728-1|AAI27729.1| 224|Homo sapiens CHIC1 protein protein. 195 2e-49
AL358796-1|CAI41484.1| 217|Homo sapiens cysteine-rich hydrophob... 195 2e-49
AL356513-1|CAH70034.1| 217|Homo sapiens cysteine-rich hydrophob... 195 2e-49
BC127727-1|AAI27728.1| 204|Homo sapiens CHIC1 protein protein. 145 2e-34
U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein. 31 4.6
U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein. 31 4.6
U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding prot... 31 4.6
D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein. 31 4.6
D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein. 31 4.6
D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein. 31 4.6
BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli... 31 4.6
AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli... 31 4.6
>BC034691-1|AAH34691.1| 165|Homo sapiens cysteine-rich hydrophobic
domain 2 protein.
Length = 165
Score = 212 bits (517), Expect = 2e-54
Identities = 95/164 (57%), Positives = 126/164 (76%)
Frame = +1
Query: 175 MADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRV 354
MADFD IY ++ +D E +EE + PDP+VVRG+G++TVFGLSN+F EFPS L +V
Sbjct: 1 MADFDEIYEEE-EDEERALEEQLLKYSPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKV 59
Query: 355 APEEYQATIARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLL 534
APEE++A+I R+N+ LKK LPVNV+WL S+WPVICLSKRT+ S+ KLL
Sbjct: 60 APEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLL 119
Query: 535 EWENSRLYNKLGLRWRLTKQHCDSSSMMEYVLLIEFIPKIPIYR 666
EWEN+RLY+KL L WRL+K+ C++++MMEYV+LIEF+PK PI+R
Sbjct: 120 EWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFR 163
>AF159423-1|AAD55981.1| 165|Homo sapiens cysteine-rich hydrophobic
2 CHIC2 protein.
Length = 165
Score = 212 bits (517), Expect = 2e-54
Identities = 95/164 (57%), Positives = 126/164 (76%)
Frame = +1
Query: 175 MADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRV 354
MADFD IY ++ +D E +EE + PDP+VVRG+G++TVFGLSN+F EFPS L +V
Sbjct: 1 MADFDEIYEEE-EDEERALEEQLLKYSPDPVVVRGSGHVTVFGLSNKFESEFPSSLTGKV 59
Query: 355 APEEYQATIARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLL 534
APEE++A+I R+N+ LKK LPVNV+WL S+WPVICLSKRT+ S+ KLL
Sbjct: 60 APEEFKASINRVNSCLKKNLPVNVRWLLCGCLCCCCTLGCSMWPVICLSKRTRRSIEKLL 119
Query: 535 EWENSRLYNKLGLRWRLTKQHCDSSSMMEYVLLIEFIPKIPIYR 666
EWEN+RLY+KL L WRL+K+ C++++MMEYV+LIEF+PK PI+R
Sbjct: 120 EWENNRLYHKLCLHWRLSKRKCETNNMMEYVILIEFLPKTPIFR 163
>BC127728-1|AAI27729.1| 224|Homo sapiens CHIC1 protein protein.
Length = 224
Score = 195 bits (475), Expect = 2e-49
Identities = 86/147 (58%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Frame = +1
Query: 229 IEEMHVT-LVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLK 405
+ E H+ PDP++VRGAG++TVFGLSN+F+ EFPS L +VAPEE++ +I R+N LK
Sbjct: 76 VSEEHLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLK 135
Query: 406 KTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWRL 585
K LPVNVKWL SLWPVICL+KRT+ S+ KL+EWEN+RLY+KL L W+L
Sbjct: 136 KALPVNVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLIEWENNRLYHKLALHWKL 195
Query: 586 TKQHCDSSSMMEYVLLIEFIPKIPIYR 666
TK+ C++S+MMEYV+LIEF+PK PI+R
Sbjct: 196 TKRKCETSNMMEYVILIEFLPKYPIFR 222
>AL358796-1|CAI41484.1| 217|Homo sapiens cysteine-rich hydrophobic
domain 1 protein.
Length = 217
Score = 195 bits (475), Expect = 2e-49
Identities = 86/147 (58%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Frame = +1
Query: 229 IEEMHVT-LVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLK 405
+ E H+ PDP++VRGAG++TVFGLSN+F+ EFPS L +VAPEE++ +I R+N LK
Sbjct: 69 VSEEHLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLK 128
Query: 406 KTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWRL 585
K LPVNVKWL SLWPVICL+KRT+ S+ KL+EWEN+RLY+KL L W+L
Sbjct: 129 KALPVNVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLIEWENNRLYHKLALHWKL 188
Query: 586 TKQHCDSSSMMEYVLLIEFIPKIPIYR 666
TK+ C++S+MMEYV+LIEF+PK PI+R
Sbjct: 189 TKRKCETSNMMEYVILIEFLPKYPIFR 215
>AL356513-1|CAH70034.1| 217|Homo sapiens cysteine-rich hydrophobic
domain 1 protein.
Length = 217
Score = 195 bits (475), Expect = 2e-49
Identities = 86/147 (58%), Positives = 113/147 (76%), Gaps = 1/147 (0%)
Frame = +1
Query: 229 IEEMHVT-LVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLK 405
+ E H+ PDP++VRGAG++TVFGLSN+F+ EFPS L +VAPEE++ +I R+N LK
Sbjct: 69 VSEEHLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLK 128
Query: 406 KTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWRL 585
K LPVNVKWL SLWPVICL+KRT+ S+ KL+EWEN+RLY+KL L W+L
Sbjct: 129 KALPVNVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLIEWENNRLYHKLALHWKL 188
Query: 586 TKQHCDSSSMMEYVLLIEFIPKIPIYR 666
TK+ C++S+MMEYV+LIEF+PK PI+R
Sbjct: 189 TKRKCETSNMMEYVILIEFLPKYPIFR 215
>BC127727-1|AAI27728.1| 204|Homo sapiens CHIC1 protein protein.
Length = 204
Score = 145 bits (352), Expect = 2e-34
Identities = 74/147 (50%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +1
Query: 229 IEEMHVT-LVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLK 405
+ E H+ PDP++VRGAG++TVFGLSN+F+ EFPS L +VAPEE++ +I R+N LK
Sbjct: 76 VSEEHLRRYAPDPVLVRGAGHITVFGLSNKFDTEFPSVLTGKVAPEEFKTSIGRVNACLK 135
Query: 406 KTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWRL 585
K LPVNVKWL SLWPVICL+KRT+ S+ KL+EWEN+RLY+K
Sbjct: 136 KALPVNVKWLLCGCLCCCCTLGCSLWPVICLNKRTRRSIQKLIEWENNRLYHK------- 188
Query: 586 TKQHCDSSSMMEYVLLIEFIPKIPIYR 666
V+LIEF+PK PI+R
Sbjct: 189 -------------VILIEFLPKYPIFR 202
>U73737-1|AAB47425.1| 1360|Homo sapiens hMSH6 protein.
Length = 1360
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>U54777-1|AAB39212.2| 1360|Homo sapiens hMSH6 protein protein.
Length = 1360
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>U28946-1|AAC50461.1| 1360|Homo sapiens G/T mismatch binding protein
protein.
Length = 1360
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>D89646-1|BAA23675.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>D89645-2|BAA23673.1| 1068|Homo sapiens GTBP-ALT protein.
Length = 1068
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>D89645-1|BAA23674.1| 1360|Homo sapiens GTBP-N protein.
Length = 1360
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>BC004246-1|AAH04246.1| 1360|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1360
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
>AY082894-1|AAL87401.1| 1358|Homo sapiens mutS homolog 6 (E. coli)
protein.
Length = 1358
Score = 31.5 bits (68), Expect = 4.6
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +1
Query: 163 LVSKMADFDAIYPDDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLS-NRFNGEFPSG 339
L++ A FD+ Y L D EN + + L + G + +G+ NR+ E P
Sbjct: 926 LITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRI-GCRTIVYWGIGRNRYQLEIPEN 984
Query: 340 LQSRVAPEEYQ 372
+R PEEY+
Sbjct: 985 FTTRNLPEEYE 995
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,721,615
Number of Sequences: 237096
Number of extensions: 2326725
Number of successful extensions: 3183
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3183
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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