Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P16
         (935 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20862-2|AAK29864.1|  179|Caenorhabditis elegans Hypothetical pr...   132   3e-31
AF248541-1|AAF63761.1|  179|Caenorhabditis elegans cysteine-rich...   132   3e-31
U20862-3|AAN65283.1|  137|Caenorhabditis elegans Hypothetical pr...    96   4e-20
Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical p...    32   0.68 
AF036704-2|ABA00183.1|  281|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z50859-3|CAA90728.1|  632|Caenorhabditis elegans Hypothetical pr...    29   6.3  

>U20862-2|AAK29864.1|  179|Caenorhabditis elegans Hypothetical
           protein W06E11.5a protein.
          Length = 179

 Score =  132 bits (320), Expect = 3e-31
 Identities = 60/151 (39%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = +1

Query: 202 DDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATI 381
           D +   +E  E +++    +P+V+RG GN+TVFG+++RFN E+P  L   +APEE  AT+
Sbjct: 22  DVMPSSDEESEPIYIPKEKEPVVIRGVGNITVFGMNSRFNTEYPPELTGYIAPEELSATL 81

Query: 382 ARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYN 561
           +R+N+VLK+ +  + +WL             S+WPV+CL++RT  +L K L+ EN  LY+
Sbjct: 82  SRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCLNRRTVLALEKCLDHENVSLYH 141

Query: 562 KLGLRWRLTKQHCD-SSSMMEYVLLIEFIPK 651
           KLGL W L ++  + S  + EYVL ++ +PK
Sbjct: 142 KLGLHWSLARRPTEPSDRLTEYVLELKTLPK 172


>AF248541-1|AAF63761.1|  179|Caenorhabditis elegans cysteine-rich
           hydrophobic protein protein.
          Length = 179

 Score =  132 bits (320), Expect = 3e-31
 Identities = 60/151 (39%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = +1

Query: 202 DDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATI 381
           D +   +E  E +++    +P+V+RG GN+TVFG+++RFN E+P  L   +APEE  AT+
Sbjct: 22  DVMPSSDEESEPIYIPKEKEPVVIRGVGNITVFGMNSRFNTEYPPELTGYIAPEELSATL 81

Query: 382 ARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQHSLNKLLEWENSRLYN 561
           +R+N+VLK+ +  + +WL             S+WPV+CL++RT  +L K L+ EN  LY+
Sbjct: 82  SRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCLNRRTVLALEKCLDHENVSLYH 141

Query: 562 KLGLRWRLTKQHCD-SSSMMEYVLLIEFIPK 651
           KLGL W L ++  + S  + EYVL ++ +PK
Sbjct: 142 KLGLHWSLARRPTEPSDRLTEYVLELKTLPK 172


>U20862-3|AAN65283.1|  137|Caenorhabditis elegans Hypothetical
           protein W06E11.5b protein.
          Length = 137

 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 39/104 (37%), Positives = 66/104 (63%)
 Frame = +1

Query: 202 DDLDDGEENIEEMHVTLVPDPIVVRGAGNMTVFGLSNRFNGEFPSGLQSRVAPEEYQATI 381
           D +   +E  E +++    +P+V+RG GN+TVFG+++RFN E+P  L   +APEE  AT+
Sbjct: 22  DVMPSSDEESEPIYIPKEKEPVVIRGVGNITVFGMNSRFNTEYPPELTGYIAPEELSATL 81

Query: 382 ARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSLWPVICLSKRTQ 513
           +R+N+VLK+ +  + +WL             S+WPV+CL++R +
Sbjct: 82  SRVNSVLKRHVQTSSRWLLCGLAFCCCSIGCSMWPVLCLNRRVR 125


>Z99281-17|CAB54456.2|  177|Caenorhabditis elegans Hypothetical
           protein Y57G11C.33 protein.
          Length = 177

 Score = 31.9 bits (69), Expect = 0.68
 Identities = 22/94 (23%), Positives = 38/94 (40%)
 Frame = +1

Query: 301 GLSNRFNGEFPSGLQSRVAPEEYQATIARINTVLKKTLPVNVKWLFXXXXXXXXXXXXSL 480
           GL  +F  E+P+ L  +V  + ++ TI RIN +      +  + +F            S 
Sbjct: 49  GLDVQFEAEYPARLTEKVPRDVWENTIVRINRIFADAEAITPQTIF-ETVLGCFTCYASY 107

Query: 481 WPVICLSKRTQHSLNKLLEWENSRLYNKLGLRWR 582
                  +R    L + L  EN  +Y+ +G   R
Sbjct: 108 AITKSTYRRKLDELQEFLNRENREIYHHVGFHIR 141


>AF036704-2|ABA00183.1|  281|Caenorhabditis elegans Hypothetical
           protein ZK185.4 protein.
          Length = 281

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = -3

Query: 288 ISSSTNNYRIWH*CHMHLLYIFFTVIEIIWINSI 187
           + S  N +R+W+  H H LY+ F V E+I ++ +
Sbjct: 108 LESRANTHRLWYKMHRH-LYLVFGVTELILLSGL 140


>Z50859-3|CAA90728.1|  632|Caenorhabditis elegans Hypothetical
           protein T26C5.3a protein.
          Length = 632

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 196 YPDDLDDGEENIEEMHVTLVPDPIV 270
           Y DD DDGE N E+    L+PDP V
Sbjct: 90  YSDDEDDGEYNDEDF-AHLIPDPNV 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,583,756
Number of Sequences: 27780
Number of extensions: 365520
Number of successful extensions: 823
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)