Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P15
(1000 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 33 0.27
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 32 0.62
12_02_1174 - 26696869-26698191 32 0.82
06_03_0905 + 25843547-25844314 32 0.82
07_03_0091 + 13312904-13313647 31 1.4
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 3.3
04_03_1022 - 21778315-21779007 30 3.3
03_01_0515 - 3864796-3865425 30 3.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 3.3
11_06_0610 - 25449085-25453284 29 4.4
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 5.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 7.7
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 7.7
>04_03_0904 + 20717005-20718087
Length = 360
Score = 33.5 bits (73), Expect = 0.27
Identities = 23/85 (27%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
Frame = +1
Query: 682 PKXPPXXXTXTPXTXQXXPXPXXLXXPHF-PXPXKXPXPXXNKXTXXXXXXPXXXXXPXX 858
PK P T TP P P P + P P P P P P
Sbjct: 202 PKPTPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTY 261
Query: 859 KKTXXXXPXPTEXXNPCXSPXPXPS 933
K P PT P P P P+
Sbjct: 262 KPQPK--PTPTPYTPPTYKPQPKPT 284
Score = 30.3 bits (65), Expect = 2.5
Identities = 21/83 (25%), Positives = 25/83 (30%)
Frame = +1
Query: 682 PKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXPXXNKXTXXXXXXPXXXXXPXXK 861
P+ P TP T + P P P+ P P P P K P
Sbjct: 263 PQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTY-KPQPKPTPTPTPYKPQPKP 321
Query: 862 KTXXXXPXPTEXXNPCXSPXPXP 930
P PT P +P P P
Sbjct: 322 TPSPYTPKPTPTP-PTYTPTPTP 343
Score = 29.9 bits (64), Expect = 3.3
Identities = 21/81 (25%), Positives = 23/81 (28%)
Frame = +1
Query: 682 PKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXPXXNKXTXXXXXXPXXXXXPXXK 861
PK P T TP P P P+ P P K T P K
Sbjct: 162 PKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPT--PTPYTPTPTPPSYK 219
Query: 862 KTXXXXPXPTEXXNPCXSPXP 924
P PT P +P P
Sbjct: 220 PQPKPNPPPTYKPQPKPNPPP 240
Score = 29.1 bits (62), Expect = 5.8
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 2/99 (2%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSPXXRXXXXXX*XXXXPXPFXXSLQ 685
PT P P P PP P + PP K P P+P P P
Sbjct: 206 PT-PYTPTPTPPSYKPQPKPNPPPTY---KPQPKPNPPPTYKPAPPTYKPQPKPNPPPTY 261
Query: 686 XXXXKXXQXP--PSXXXAXPXRXXXXXPTSPXPKXXXPP 796
K P P P P +P PK PP
Sbjct: 262 KPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPP 300
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 32.3 bits (70), Expect = 0.62
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
P P P P PP P PP K PPP+P
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAP 389
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.82
Identities = 25/102 (24%), Positives = 29/102 (28%)
Frame = +1
Query: 658 PSTLXXXPPKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXPXXNKXTXXXXXXPX 837
P + PP PP TP + P P P P K P K +
Sbjct: 218 PPSPPPPPPTVPPRTPGDTPAVVEPKPQPPP---PPPRAPVKMPRVLEPKPSPPPPSPLP 274
Query: 838 XXXXPXXKKTXXXXPXPTEXXNPCXSPXPXPSGSXXXXXIPP 963
T P PT+ P SP P P PP
Sbjct: 275 PPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQPSQRYWTPP 316
Score = 29.1 bits (62), Expect = 5.8
Identities = 26/100 (26%), Positives = 27/100 (27%), Gaps = 3/100 (3%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPS---PXXRXXXXXX*XXXXPXPFXX 676
P+ P P P PP P PP K PPPS P P
Sbjct: 150 PSLPPPPPPPPPPPPPRPPSVKPPVVQP-KPQPPPSLQPPSPPPPPPTRPPSVKPPVVQP 208
Query: 677 SLQXXXXKXXQXPPSXXXAXPXRXXXXXPTSPXPKXXXPP 796
Q PP P R P PK PP
Sbjct: 209 KPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPP 248
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.9 bits (69), Expect = 0.82
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = +2
Query: 503 HPTGPKXPXPXPPXXXXF--PIXSXPPXXXXNK---XXPPPSPXXR 625
HP GPK P P PP + P+ PP K PP P R
Sbjct: 52 HPKGPKNPTPRPPKGPTYPSPVTRPPPLVAPPKVPVTHPPKGPVTR 97
>07_03_0091 + 13312904-13313647
Length = 247
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/83 (26%), Positives = 25/83 (30%)
Frame = +1
Query: 682 PKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXPXXNKXTXXXXXXPXXXXXPXXK 861
P P T + Q P P P P P P P P P K
Sbjct: 46 PDPTPKPQPETKPSPQPNPQPNPQPDPK-PSPQPDPKPTPQPEPKQD---PQPNPQPDPK 101
Query: 862 KTXXXXPXPTEXXNPCXSPXPXP 930
++ P PT NP P P P
Sbjct: 102 QSPQPDPKPTPQPNPKQDPQPNP 124
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 3.3
Identities = 23/88 (26%), Positives = 23/88 (26%)
Frame = +2
Query: 515 PKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSPXXRXXXXXX*XXXXPXPFXXSLQXXX 694
P P P PP P S PP PPP P P P L
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPP------PPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCL 598
Query: 695 XKXXQXPPSXXXAXPXRXXXXXPTSPXP 778
PP P R P P P
Sbjct: 599 VPSPPPPPPPPPILPNRSVPPPPPPPPP 626
Score = 29.5 bits (63), Expect = 4.4
Identities = 24/109 (22%), Positives = 26/109 (23%)
Frame = +1
Query: 604 PPLXXXXXXPXXXIXXXXPSTLXXXPPKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXK 783
PP P S+ PP PP P P P L P P
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP 622
Query: 784 XPXPXXNKXTXXXXXXPXXXXXPXXKKTXXXXPXPTEXXNPCXSPXPXP 930
P P N P P P N +P P P
Sbjct: 623 PPPPLPNHSV--LPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPP 669
>04_03_1022 - 21778315-21779007
Length = 230
Score = 29.9 bits (64), Expect = 3.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +1
Query: 679 PPKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXP 795
PP PP +P Q P PH P P P P
Sbjct: 45 PPYVPPHLLPPSPAPQQWYDHPPNYHPPHTPAPAPAPGP 83
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
P P P P PP P PP K PPP P
Sbjct: 84 PPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPP 120
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 658 PSTLXXXPPKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXKXPXP 795
P PP PP P + P P P P P K P P
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
Score = 29.1 bits (62), Expect = 5.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
P P P PP P PP K PPP P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.4
Identities = 26/126 (20%), Positives = 35/126 (27%), Gaps = 2/126 (1%)
Frame = +1
Query: 592 QXTXPPLXXXXXXPXXXIXXXXPSTLXXXPPKXPPXXXTXTPXTXQXXPXPXXLXXPHFP 771
+ + PP P PS + P PP +P + P P
Sbjct: 811 EESSPPTPEKSPSPPSGHEGTPPSPVKSSSP--PPEAHVSSPPPEKSSSPPPEAHVSSPP 868
Query: 772 XPXKXPXPXXNKX--TXXXXXXPXXXXXPXXKKTXXXXPXPTEXXNPCXSPXPXPSGSXX 945
P K P P K T P T P++ P +P P S
Sbjct: 869 PPEKSPPPPETKSPPTLTPEISPPPEGKSPPSHTPESSSPPSKESEPPPTPTPKSSPPSH 928
Query: 946 XXXIPP 963
+PP
Sbjct: 929 EEYVPP 934
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 5.8
Identities = 24/110 (21%), Positives = 26/110 (23%)
Frame = +1
Query: 604 PPLXXXXXXPXXXIXXXXPSTLXXXPPKXPPXXXTXTPXTXQXXPXPXXLXXPHFPXPXK 783
PP+ P + P PP PP P P PH P
Sbjct: 227 PPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAFPF-PLPPWPWAPPPAFPFPHLPPIFS 285
Query: 784 XPXPXXNKXTXXXXXXPXXXXXPXXKKTXXXXPXPTEXXNPCXSPXPXPS 933
P P P P P P P P P PS
Sbjct: 286 PPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPP--PPPPPPS 333
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 5.8
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = +2
Query: 515 PKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
P P P PP + + PP PPP P
Sbjct: 1082 PPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPP 1115
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 7.7
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +2
Query: 506 PTGPKXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
P P+ P PP + PP N PPP P
Sbjct: 74 PGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPP 110
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 28.7 bits (61), Expect = 7.7
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = +2
Query: 518 KXPXPXPPXXXXFPIXSXPPXXXXNKXXPPPSP 616
+ P P PP P + PP PPP+P
Sbjct: 34 RRPSPPPPPPSPVPSPAPPPPPHRPSPSPPPNP 66
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,113,202
Number of Sequences: 37544
Number of extensions: 212228
Number of successful extensions: 888
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2928685000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -