Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P14
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.15
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.15
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.15
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPP 445
PP GG+ P G PPPP PP PP F PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPP---XFPPXKKXXXXKXPPXXFFXXAPPXFGXGG 463
PP GG+ P G PPPP PP PP PP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPP 445
PP GG+ P G PPPP PP PP F PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPP---XFPPXKKXXXXKXPPXXFFXXAPPXFGXGG 463
PP GG+ P G PPPP PP PP PP GG
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPP 445
PP GG+ P G PPPP PP PP F PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPP 368
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPP---XFPPXKKXXXXKXPPXXFFXXAPPXFGXGG 463
PP GG+ P G PPPP PP PP PP GG
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 317 PPXXXGGVFPXXX-GXPPPPXFPPXKKXXXXKXPP 418
PP GG+ P G PPPP PP PP
Sbjct: 218 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 317 PPXXXGGVFPXXX-GXPPPPXFPPXKKXXXXKXPP 418
PP GG+ P G PPPP PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +2
Query: 317 PPXXXGGVFPXXX-GXPPPPXFPPXKKXXXXKXPP 418
PP GG+ P G PPPP PP PP
Sbjct: 204 PPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +3
Query: 333 GGFSPXKXGXPPPLXSPPXKNXXXXXXPPXXFXXXPXPXLGGGGXXXXXPPQ 488
G F+P PP +PP P P P G G PPQ
Sbjct: 376 GNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQ 427
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPPXFGXG 460
PP GG P PPP PP PP +PP G G
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ-AGGSPPPAGTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPPXFGXG 460
PP GG P PPP PP PP +PP G G
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ-AGGSPPPAGTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +2
Query: 317 PPXXXGGVFPXXXGXPPPPXFPPXKKXXXXKXPPXXFFXXAPPXFGXG 460
PP GG P PPP PP PP +PP G G
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQ-AGGSPPPAGTG 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,430,274
Number of Sequences: 27780
Number of extensions: 206625
Number of successful extensions: 600
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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