Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P11
         (1291 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    38   0.013
05_03_0458 + 14280953-14281866,14281964-14282912                       31   2.0  
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    31   2.6  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   3.4  
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899...    29   6.0  
03_06_0328 - 33172369-33173691                                         29   8.0  

>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 28/89 (31%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
 Frame = +1

Query: 7    PXXTGXGXXPXPPXRX*XXRGXXGXPXXXXPPXPKGFXXXXXXXGTGGGX--PXXPHXXX 180
            P   G G  P PP       G  G P    PP P GF          GG   P  P    
Sbjct: 1140 PLPEGIGGVPPPPP----VGGLGGPPA---PPPPAGFRGGTPPPNAHGGVAPPPPPPRGH 1192

Query: 181  XNQKNPPHPXXTKXPIXX*NXXXGPPPPP 267
                 PP P     P        GPPPPP
Sbjct: 1193 GGVGGPPTPPGAPAPPMPPGVPGGPPPPP 1221


>05_03_0458 + 14280953-14281866,14281964-14282912
          Length = 620

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +2

Query: 254 PPPXLXPKPXXXXXTTXETPXHXTPPNXPXXNTXPN 361
           P P L P P     TT     H TPP  P   T P+
Sbjct: 67  PLPPLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPS 102


>04_04_0233 +
           23801944-23802598,23802914-23803047,23803548-23803730,
           23804145-23804318
          Length = 381

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 16/59 (27%), Positives = 18/59 (30%)
 Frame = +1

Query: 199 PHPXXTKXPIXX*NXXXGPPPPPXTKTXXXXXNHXRXXXXXXXXXXXXXKHXPXPXPPP 375
           P P  +  P        GPPPPP +        H               K  P P PPP
Sbjct: 9   PPPTPSPPPFSSRPRVVGPPPPPPSDPPPPPPPHHHHHHRRRHRHSKKPKPQPQPQPPP 67


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/83 (25%), Positives = 24/83 (28%)
 Frame = +1

Query: 19  GXGXXPXPPXRX*XXRGXXGXPXXXXPPXPKGFXXXXXXXGTGGGXPXXPHXXXXNQKNP 198
           G    P PP          G P    PP P                   P     N++NP
Sbjct: 688 GPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNP 747

Query: 199 PHPXXTKXPIXX*NXXXGPPPPP 267
           P P     P+        PPPPP
Sbjct: 748 PAPPPP--PLMTGKKAPAPPPPP 768


>05_05_0155 + 22787658-22787930,22788029-22788096,22789600-22789915,
            22790207-22790323
          Length = 257

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +2

Query: 1064 HHPDXXLTXGPQKKTHPPXXPXPXHH 1141
            HHP       P    HPP  P P HH
Sbjct: 52   HHPHPPHHPHPPHHPHPPHHPHPPHH 77



 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 1064 HHPDXXLTXGPQKKTHPPXXPXPXHHP 1144
            HHP       P    HPP  P P HHP
Sbjct: 41   HHPHPP-HHHPPHHPHPPHHPHPPHHP 66



 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = +2

Query: 1064 HHPDXXLTXGPQKKTHPPXXPXPXHHP 1144
            HHP       P    HPP  P P HHP
Sbjct: 48   HHPPHH--PHPPHHPHPPHHPHPPHHP 72


>03_06_0328 - 33172369-33173691
          Length = 440

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 1165 PHPPAARPTPQKTIRXTTXPLQAKSP 1242
            P PP++RP P  +    T P Q K+P
Sbjct: 197  PPPPSSRPPPPSSFSAVTTPWQFKNP 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,538,850
Number of Sequences: 37544
Number of extensions: 334567
Number of successful extensions: 1025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)