Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P09
(1161 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.081
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 34 0.19
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 33 0.33
12_02_1174 - 26696869-26698191 31 2.3
07_03_1136 + 24218601-24218734,24218769-24219906 30 4.0
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.3
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 29 5.3
10_03_0023 - 7151465-7152111,7152222-7152405 29 7.0
04_01_0330 - 4369326-4370852 29 9.3
03_01_0515 - 3864796-3865425 29 9.3
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.5 bits (78), Expect = 0.081
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -2
Query: 971 PPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXXPPPPXXP 798
PP P P P P P P P P P P PPPP P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 29.1 bits (62), Expect = 7.0
Identities = 16/64 (25%), Positives = 16/64 (25%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P PP P P P P P P P P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG 376
Query: 818 PPPP 807
PPPP
Sbjct: 377 PPPP 380
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.3 bits (75), Expect = 0.19
Identities = 18/67 (26%), Positives = 18/67 (26%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P P PP P P P P P P P P
Sbjct: 559 PAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVP 618
Query: 818 PPPPXXP 798
PPPP P
Sbjct: 619 PPPPPPP 625
Score = 33.1 bits (72), Expect = 0.43
Identities = 22/88 (25%), Positives = 22/88 (25%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P P PPS P P P P P P P P P
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQP---PPPPPPPPLPNCLVP 600
Query: 818 PPPPXXPXXXXXXXXXXPXXXXXXXPXP 735
PPP P P P P
Sbjct: 601 SPPPPPPPPPILPNRSVPPPPPPPPPLP 628
Score = 29.9 bits (64), Expect = 4.0
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = -2
Query: 194 PPXPPXXXXXXXXTXSXXXGXXXPXXXXXXXXXXPLTPXPXXXGXXXPLTXXRXGGXPPP 15
PP PP S P L P P P+ R PPP
Sbjct: 563 PPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP 622
Query: 14 PPP 6
PPP
Sbjct: 623 PPP 625
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = -2
Query: 971 PPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXXPPPPXXP 798
PP P P P P P P P P PPPP P
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPP 643
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = -2
Query: 986 PXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXXPPPP 807
P P PP P P P P P P P P PPPP
Sbjct: 1124 PLPDGPPPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPP 1183
Query: 806 XXP 798
P
Sbjct: 1184 PPP 1186
>12_02_1174 - 26696869-26698191
Length = 440
Score = 30.7 bits (66), Expect = 2.3
Identities = 18/68 (26%), Positives = 18/68 (26%), Gaps = 1/68 (1%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P P PP P P P P P P P P
Sbjct: 150 PSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPK 209
Query: 818 P-PPPXXP 798
P PPP P
Sbjct: 210 PQPPPTLP 217
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/67 (25%), Positives = 17/67 (25%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P P PPS P P P P P P P
Sbjct: 158 PPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLP 217
Query: 818 PPPPXXP 798
PP P P
Sbjct: 218 PPSPPPP 224
Score = 29.9 bits (64), Expect = 4.0
Identities = 20/95 (21%), Positives = 21/95 (22%)
Frame = -2
Query: 1082 PXXPPPXXXXXXXXXXXXXXXXXXXXXXPXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXX 903
P PPP P P P P + P P
Sbjct: 214 PTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSPL 273
Query: 902 PXXXXXXXXPXXXPXXXPXXPXPXXXXXPPPPXXP 798
P P P P P PPPP P
Sbjct: 274 PPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPPQQP 308
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = -3
Query: 952 PXXXXXPPXXXPXXXXXXXXXXXXXPPXXXXLXXXXPPXPXPXXPPXPP 806
P PP P PP PP P P PP PP
Sbjct: 117 PALSPVPPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPP 165
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 4.0
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = +3
Query: 15 GGGXTPXPXXG*XGXXPPXXGXGG*XXXXXXXXXXXGXXXPXXXGXGXXXXXXXXXGXGG 194
GGG P P G P G GG G P G G G GG
Sbjct: 93 GGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGG 152
Query: 195 G 197
G
Sbjct: 153 G 153
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXX 819
P P P PP P P P P P P P P P
Sbjct: 272 PPAFPFPHLPPIFSPPSPPPPPPPAFPFPF--PQLPPLPHFPPL-PSFYPSPPPPPPPPP 328
Query: 818 PPPPXXP 798
PPPP P
Sbjct: 329 PPPPSFP 335
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 29.5 bits (63), Expect = 5.3
Identities = 19/72 (26%), Positives = 19/72 (26%), Gaps = 5/72 (6%)
Frame = -2
Query: 998 PXXXPXPXXPPSXPXPXXXXXXXPXXP-----XXXXXPXXXXXXXXPXXXPXXXPXXPXP 834
P P P PS P P P P P P P P P P
Sbjct: 157 PKPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGP 216
Query: 833 XXXXXPPPPXXP 798
PP P P
Sbjct: 217 KPKPGPPQPWWP 228
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -2
Query: 92 PLTPXPXXXGXXXPLTXXRXGGXPPPPPP 6
PLTP P P+ PPPPPP
Sbjct: 215 PLTPQPPPSSLIPPVLPLPLLNPPPPPPP 243
>04_01_0330 - 4369326-4370852
Length = 508
Score = 28.7 bits (61), Expect = 9.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 53 PLTXXRXGGXPPPPPP 6
P R GG PPPPPP
Sbjct: 166 PFMRVRHGGGPPPPPP 181
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/58 (25%), Positives = 15/58 (25%)
Frame = -2
Query: 971 PPSXPXPXXXXXXXPXXPXXXXXPXXXXXXXXPXXXPXXXPXXPXPXXXXXPPPPXXP 798
PP P P P P P P P P PPPP P
Sbjct: 49 PPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSP 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.165 0.563
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,145,268
Number of Sequences: 37544
Number of extensions: 269595
Number of successful extensions: 1727
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
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