Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P08
         (915 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0003 - 4862220-4863428                                           29   3.9  
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781...    28   9.0  
01_07_0106 - 41107673-41107942,41108362-41108574,41108877-411090...    28   9.0  

>03_02_0003 - 4862220-4863428
          Length = 402

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 210 SPAAVISTEKYAASTSTLVHDTTEPCQNLFNLLPEPSHKK 329
           SP + +ST  Y+ +TS   H  +EP   +    P  S ++
Sbjct: 263 SPQSCVSTTDYSTATSVTPHSVSEPSDTILAASPTGSQRE 302


>09_04_0345 +
           16876489-16876614,16876718-16876876,16877989-16878102,
           16878701-16878882,16879142-16879241,16879597-16879638,
           16879818-16879994,16880084-16880175,16880633-16880779,
           16880832-16881036
          Length = 447

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = +3

Query: 384 VKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGKKSGLLSILPQPKNGVTLTNKSF 551
           VKP  + ++  ++    + D L N K    SGGKKSG  S   +P   + L +++F
Sbjct: 123 VKPIVEFALSQVKAL--LRDRL-NGKTSAGSGGKKSGGSSEKTEPSASIELNSQNF 175


>01_07_0106 -
           41107673-41107942,41108362-41108574,41108877-41109041,
           41109431-41109649,41110205-41110324,41110427-41110489,
           41111034-41111606,41111691-41111858,41112414-41112495,
           41112667-41112743,41113031-41113101,41114315-41114363
          Length = 689

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/55 (25%), Positives = 29/55 (52%)
 Frame = +3

Query: 312 EPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHS 476
           E S  + ++V     F  +    I   +A + VPSL+D  ++++ +P  + ++HS
Sbjct: 159 EESKLRVVLVSASHPFGEQPINGIPNTEAAVEVPSLKDTLNIKNEIPVAEKEVHS 213


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,152,541
Number of Sequences: 37544
Number of extensions: 343161
Number of successful extensions: 909
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)