Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P08
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99720-1|CAA68060.1| 491|Homo sapiens TPRC protein. 39 0.022
X97124-1|CAA65791.1| 491|Homo sapiens prcc protein. 39 0.022
BC010450-1|AAH10450.1| 491|Homo sapiens papillary renal cell ca... 39 0.022
BC004913-1|AAH04913.1| 491|Homo sapiens papillary renal cell ca... 39 0.022
AL590666-16|CAI16350.1| 491|Homo sapiens papillary renal cell c... 39 0.022
AB011090-1|BAA25444.1| 650|Homo sapiens KIAA0518 protein protein. 35 0.36
BC044844-1|AAH44844.1| 450|Homo sapiens KIAA1641 protein protein. 31 7.7
BC031883-1|AAH31883.1| 450|Homo sapiens KIAA1641 protein protein. 31 7.7
>X99720-1|CAA68060.1| 491|Homo sapiens TPRC protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 387 KPKAKISVPSL-QDFKDMEDSLPNNKNKIHSGGKK-SGLLSILPQPKN-GVTLTNKSFIP 557
K KI+ P L + D E+ P K I G + +GL ++LPQPKN V TN+ +P
Sbjct: 142 KEPVKIAAPELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLP 201
Query: 558 NILVKNP 578
+ + P
Sbjct: 202 HAFSRKP 208
>X97124-1|CAA65791.1| 491|Homo sapiens prcc protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 387 KPKAKISVPSL-QDFKDMEDSLPNNKNKIHSGGKK-SGLLSILPQPKN-GVTLTNKSFIP 557
K KI+ P L + D E+ P K I G + +GL ++LPQPKN V TN+ +P
Sbjct: 142 KEPVKIAAPELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLP 201
Query: 558 NILVKNP 578
+ + P
Sbjct: 202 HAFSRKP 208
>BC010450-1|AAH10450.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 387 KPKAKISVPSL-QDFKDMEDSLPNNKNKIHSGGKK-SGLLSILPQPKN-GVTLTNKSFIP 557
K KI+ P L + D E+ P K I G + +GL ++LPQPKN V TN+ +P
Sbjct: 142 KEPVKIAAPELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLP 201
Query: 558 NILVKNP 578
+ + P
Sbjct: 202 HAFSRKP 208
>BC004913-1|AAH04913.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 387 KPKAKISVPSL-QDFKDMEDSLPNNKNKIHSGGKK-SGLLSILPQPKN-GVTLTNKSFIP 557
K KI+ P L + D E+ P K I G + +GL ++LPQPKN V TN+ +P
Sbjct: 142 KEPVKIAAPELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLP 201
Query: 558 NILVKNP 578
+ + P
Sbjct: 202 HAFSRKP 208
>AL590666-16|CAI16350.1| 491|Homo sapiens papillary renal cell
carcinoma (translocation-associated) protein.
Length = 491
Score = 39.1 bits (87), Expect = 0.022
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 387 KPKAKISVPSL-QDFKDMEDSLPNNKNKIHSGGKK-SGLLSILPQPKN-GVTLTNKSFIP 557
K KI+ P L + D E+ P K I G + +GL ++LPQPKN V TN+ +P
Sbjct: 142 KEPVKIAAPELHKGDSDSEEDEPTKKKTILQGSSEGTGLSALLPQPKNLTVKETNRLLLP 201
Query: 558 NILVKNP 578
+ + P
Sbjct: 202 HAFSRKP 208
>AB011090-1|BAA25444.1| 650|Homo sapiens KIAA0518 protein protein.
Length = 650
Score = 35.1 bits (77), Expect = 0.36
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +3
Query: 330 PLVVEEDDEFLHKKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGKKSGLLSIL 509
PL++ +D+ + EK + +P ++ V + +++DSL +NK I G SGL +
Sbjct: 484 PLLLHLEDDDFSENEKQLAEPASEPDVLKIVIDSEIKDSLLSNKKAIDGGKNTSGLPAEP 543
Query: 510 PQPKNGVTLTNKSFIPN 560
+ TL K+ + N
Sbjct: 544 ESVSSPPTLHMKTGLEN 560
>BC044844-1|AAH44844.1| 450|Homo sapiens KIAA1641 protein protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.7
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 4/146 (2%)
Frame = +3
Query: 138 KKTNMALVAYENSDSSDFEDCDTESPAAVISTEKYAASTSTLVHDTTEPCQNLFNLLPEP 317
+K + + + E D ++ P A+ +T S + + + ++ +P
Sbjct: 5 EKDSFSNITREKKDGEISRTVSSQKPPALKATSVKEDSVLNIAREKKDGEKSRTVSFEQP 64
Query: 318 SHKKPLVVEEDDEFLH----KKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGK 485
K +E D L+ KK+ + + PSL+ D EDS+PN + +
Sbjct: 65 PGLKA-TRDEKDSLLNIARGKKDGEKTRRVSSHKQPSLKATSDKEDSVPNMATET-KDEQ 122
Query: 486 KSGLLSILPQPKNGVTLTNKSFIPNI 563
SG +S QP T K + NI
Sbjct: 123 ISGTVSCQKQPALKATSDKKDSVSNI 148
>BC031883-1|AAH31883.1| 450|Homo sapiens KIAA1641 protein protein.
Length = 450
Score = 30.7 bits (66), Expect = 7.7
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 4/146 (2%)
Frame = +3
Query: 138 KKTNMALVAYENSDSSDFEDCDTESPAAVISTEKYAASTSTLVHDTTEPCQNLFNLLPEP 317
+K + + + E D ++ P A+ +T S + + + ++ +P
Sbjct: 5 EKDSFSNITREKKDGEISRTVSSQKPPALKATSVKEDSVLNIAREKKDGEKSRTVSFEQP 64
Query: 318 SHKKPLVVEEDDEFLH----KKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGK 485
K +E D L+ KK+ + + PSL+ D EDS+PN + +
Sbjct: 65 PGLKA-TRDEKDSLLNIARGKKDGEKTRRVSSHKQPSLKATSDKEDSVPNMATET-KDEQ 122
Query: 486 KSGLLSILPQPKNGVTLTNKSFIPNI 563
SG +S QP T K + NI
Sbjct: 123 ISGTVSCQKQPALKATSDKKDSVSNI 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,175,253
Number of Sequences: 237096
Number of extensions: 2013780
Number of successful extensions: 4224
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4224
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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