Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P08
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.87
U42832-2|AAA83572.1| 558|Caenorhabditis elegans Udp-glucuronosy... 30 2.7
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 29 3.5
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 29 3.5
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 29 3.5
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 29 4.6
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 29 4.6
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 29 6.1
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 28 8.1
Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotid... 28 8.1
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 309 PEPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGKK 488
P P+ P+VVE+ E KE+ K K K P+ F+ DS +++ S
Sbjct: 177 PAPARTAPIVVEKKIEKPAVKEQKARKKKEKTPTPTESSFESSSDSSSTSESSTSSESSS 236
Query: 489 S 491
S
Sbjct: 237 S 237
>U42832-2|AAA83572.1| 558|Caenorhabditis elegans
Udp-glucuronosyltransferase protein57 protein.
Length = 558
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 327 KPLVVEEDDEFLHKKEKHIVKPKAKISVPSLQDFKDMEDSLPN 455
KP+++ E+ + K + H+V+ K +V + FK +ED++PN
Sbjct: 52 KPVLIPEEPRLV-KPKLHLVREKVIKNVLNKDLFKPLEDAVPN 93
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 YAASTSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSL 419
Y + S H PC + + PE P VE + L K K K +SV +
Sbjct: 80 YGQTGSGKTHTMLGPCDSWTD--PELMGLIPRSVEHVFQHLDTKAKKCQKLTFSVSVEFV 137
Query: 420 QDFKDMEDSLPNNKNKI--HSGGKKSGLLSILPQ 515
+ + ++ L N KNK+ GK L+ LP+
Sbjct: 138 ELYNEVIYDLLNAKNKVQLRDSGKDIQLVGALPK 171
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 YAASTSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSL 419
Y + S H PC + + PE P VE + L K K K +SV +
Sbjct: 80 YGQTGSGKTHTMLGPCDSWTD--PELMGLIPRSVEHVFQHLDTKAKKCQKLTFSVSVEFV 137
Query: 420 QDFKDMEDSLPNNKNKI--HSGGKKSGLLSILPQ 515
+ + ++ L N KNK+ GK L+ LP+
Sbjct: 138 ELYNEVIYDLLNAKNKVQLRDSGKDIQLVGALPK 171
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 YAASTSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSL 419
Y + S H PC + + PE P VE + L K K K +SV +
Sbjct: 80 YGQTGSGKTHTMLGPCDSWTD--PELMGLIPRSVEHVFQHLDTKAKKCQKLTFSVSVEFV 137
Query: 420 QDFKDMEDSLPNNKNKI--HSGGKKSGLLSILPQ 515
+ + ++ L N KNK+ GK L+ LP+
Sbjct: 138 ELYNEVIYDLLNAKNKVQLRDSGKDIQLVGALPK 171
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 360 LHKKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGKKSGLLSILPQPKN 524
++ K + VK K + P L+DF + L N + IH +S P+P N
Sbjct: 89 VYGKREITVKNSTKTASPILKDFVKNYEHLENVRRVIHRDNSRSVFAKEAPRPVN 143
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +3
Query: 360 LHKKEKHIVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSGGKKSGLLSILPQPKN 524
++ K + VK K + P L+DF + L N + IH +S P+P N
Sbjct: 81 VYGKREITVKNSTKTASPILKDFVKNYEHLENVRRVIHRDNSRSVFAKEAPRPVN 135
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +3
Query: 249 STSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKHIVKPKAKISVPSLQDF 428
ST H E C E ++ L+V D + K+EKH K K D
Sbjct: 120 STYKTYHYEQEKCNCFIETCDEETNSTELMVLYPDCYCGKREKHCDLSKEKCHWTPDSDH 179
Query: 429 KDMEDSLPNNKNKI 470
D++ + + NK+
Sbjct: 180 DDLKFEVFESSNKV 193
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/93 (27%), Positives = 40/93 (43%)
Frame = +3
Query: 201 DTESPAAVISTEKYAASTSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKH 380
D +ST ST + H E + N E KKP +DDE KKEK
Sbjct: 54 DPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKN--DEADSKKPDSASKDDESSTKKEK- 110
Query: 381 IVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSG 479
+PK + + ++ K +++ L +N +H G
Sbjct: 111 --EPKKFLKIVGGREIK-LQEHL---RNPVHLG 137
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/93 (27%), Positives = 40/93 (43%)
Frame = +3
Query: 201 DTESPAAVISTEKYAASTSTLVHDTTEPCQNLFNLLPEPSHKKPLVVEEDDEFLHKKEKH 380
D +ST ST + H E + N E KKP +DDE KKEK
Sbjct: 54 DPTKKGTTMSTMSQVKSTKSKNHKKEEKKKGSKN--DEADSKKPDSASKDDESSTKKEK- 110
Query: 381 IVKPKAKISVPSLQDFKDMEDSLPNNKNKIHSG 479
+PK + + ++ K +++ L +N +H G
Sbjct: 111 --EPKKFLKIVGGREIK-LQEHL---RNPVHLG 137
>Z70207-3|CAA94132.1| 336|Caenorhabditis elegans Hypothetical
protein F15A2.3 protein.
Length = 336
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -1
Query: 210 FLYHNLQNHSNRYFHTLLMPYLSFS 136
FLY L HSN YF LL + SF+
Sbjct: 256 FLYSQLSGHSNLYFEYLLNIFGSFT 280
>Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical
protein F21D5.5 protein.
Length = 407
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 381 IVKPKA-KISVPSLQDFKDMEDSLPNNKNKIHSGGKK 488
++K K+ K+ + QD++ + DS+P++ K+HS G K
Sbjct: 62 LIKTKSGKVFPTNCQDWQLLYDSIPSDFKKLHSDGFK 98
>U58755-2|AAB00692.1| 362|Caenorhabditis elegans Hypothetical
protein C34D4.10 protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 720 PVLIAPEVLSVDSELVQNTNTSKGLSGFDSHINT 821
P+ I PEV + S+ TN S G++ FD+ + T
Sbjct: 245 PICIRPEVPRISSDAEHVTNKSIGVNKFDAKLFT 278
>AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotide
kinase 3' phosphataseprotein.
Length = 407
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 381 IVKPKA-KISVPSLQDFKDMEDSLPNNKNKIHSGGKK 488
++K K+ K+ + QD++ + DS+P++ K+HS G K
Sbjct: 62 LIKTKSGKVFPTNCQDWQLLYDSIPSDFKKLHSDGFK 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,728
Number of Sequences: 27780
Number of extensions: 343373
Number of successful extensions: 1137
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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