Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_P07
(1157 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.30
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 0.76
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.6
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 1.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 2.1
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 5.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.006
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 958 PXGXPPXAPXQXPPPPXPPPXRXAGXXLQTAXPXPP 1065
P PP AP PPP PPP AG P PP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.93
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 958 PXGXPPXAPXQXPPPPXPPPXRXAGXXLQTAXPXP 1062
P PP PPPP PPP + + P P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 625 PXPXXXGXXGPGPSXAXPPPXTPSXPGXPPPP 720
P P P P+ PP P G PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 613 PKDXPXPXXXGXXGPGPSXAXPPPXTPSXPGXPPPPXHXXXXXPXRPXHXP 765
P P P P PP P PPPP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.5 bits (58), Expect = 3.7
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = +1
Query: 958 PXGXPPXA--PXQXPPP-PXPPPXRXAGXXLQTAXPXPPHXXGQAPGXPP 1098
P PP P P P P PPP G P PP G P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGG--PPPPPPPPGVAGAGPPPPP 779
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.9 bits (69), Expect = 0.17
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +1
Query: 970 PPXAPXQXPPPPXPPPXRXAGXXLQTAXPXPPHXXGQAPGXP 1095
PP P PPPP PP AG + P PP AP P
Sbjct: 1707 PPPPPMSVPPPPSAPP-MPAG---PPSAPPPPLPASSAPSVP 1744
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Frame = +1
Query: 655 PGPSXAXPPPXTPSXPGXPP--PP 720
P P PPP P P PP PP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 879 PSPXXAPAXPPXXPPPHXXXGRXPXXP 959
PS PA PP PPP P P
Sbjct: 1718 PSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.30
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +1
Query: 958 PXGXPPXAPXQXPPPPXPPPXRXAGXXLQTAXPXPPHXXGQAPGXPP 1098
P PP P P P PP L P P AP PP
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 994 PPPPXPPPXRXAGXXLQTAXPXPPHXXGQAPGXPP 1098
PPPP PP AG + P PP P PP
Sbjct: 337 PPPPPPPRSNAAG-----SIPLPPQGRSAPPPPPP 366
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 577 PXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXP-PPXTPSXPGXPPPP 720
P SAP P P P P P+ PP P+ P PP P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.9 bits (59), Expect = 2.8
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 958 PXGXPPXAPXQXPP--PPXPPPXRXAGXXLQTAXPXPPHXXGQAPGXPP 1098
P PP P PP PP PP G A P PP AP PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMG--APAAPPLPP----SAPIAPP 458
Score = 27.5 bits (58), Expect = 3.7
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = +1
Query: 958 PXGXPPXAPXQXPPPPXPP--PXRXAG----XXLQTAXPXPPHXXGQAPGXP 1095
P P AP P PP P P AG L A P PP AP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.70
Identities = 22/94 (23%), Positives = 28/94 (29%)
Frame = +1
Query: 499 PAXSPRTXXXPIXXRTTXLXPXAR*XPXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXP 678
P P P+ + P + + P A P P P P PS P
Sbjct: 1122 PVPKPSVAAPPVPV-PSGAPPVPKPSVAAPPVPAPSGAPP-VPKPSVAAPPVPAPSSGIP 1179
Query: 679 PPXTPSXPGXPPPPXHXXXXXPXRPXHXPTLAPP 780
P P+ P PP P P + PP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.6
Identities = 22/68 (32%), Positives = 23/68 (33%)
Frame = +1
Query: 577 PXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXPPPXTPSXPGXPPPPXHXXXXXPXRPX 756
P AP P P P PS A PP PS G PP P P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS--GAPPVP---KPSVAAPPV 1133
Query: 757 HXPTLAPP 780
P+ APP
Sbjct: 1134 PVPSGAPP 1141
Score = 28.3 bits (60), Expect = 2.1
Identities = 24/97 (24%), Positives = 33/97 (34%), Gaps = 1/97 (1%)
Frame = +1
Query: 499 PAXSPRTXXXPIXXRTTXLXPXAR*XPXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXP 678
P P P+ ++ + P + P P P P P PS A P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP-VPKPSVGVPPVPPPSTA-P 1217
Query: 679 PPXTPSXPGXP-PPPXHXXXXXPXRPXHXPTLAPPRA 786
P TPS P P P P P+++ PR+
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRS 1254
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = +1
Query: 970 PPXAPXQXPPPPXPPPXRXAGXXLQTAXPXPPHXXGQAPGXPP 1098
PP PP P P + T+ P P AP PP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 27.1 bits (57), Expect = 5.0
Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Frame = +1
Query: 454 PLRTHXPCXPXP*-CXPAXSPRTXXXPIXXRTTXLXPXAR*XPXSAPXXAXRXXPKDXPX 630
P + P P P P P P+ + + P P AP + P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPP-VPKPSVAAPPV 1133
Query: 631 PXXXGXXG-PGPSXAXPPPXTPSXPGXPPPP 720
P G P PS A PP PS G PP P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPS--GAPPVP 1162
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect(2) = 0.76
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +1
Query: 994 PPPPXPPPXRXAGXXLQTAXPXPPHXXGQA--PGXPP 1098
PPPP PPP P + G+A P PP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP 225
Score = 21.8 bits (44), Expect(2) = 0.76
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 982 PXQXPPPPXPPP 1017
P PPP PPP
Sbjct: 184 PSDYNPPPPPPP 195
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +1
Query: 655 PGPSXAXPPPXTPSXPGXPPPPXHXXXXXPXRPXHXPTLAPP 780
PG S A PP T + PG P PP P P + PP
Sbjct: 487 PGTS-APLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP 527
Score = 26.6 bits (56), Expect = 6.5
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +1
Query: 583 SAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXPPPXTPSXPGXP---PPPXHXXXXXPXRP 753
SAP P P P G G PP P P P P P P
Sbjct: 490 SAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMP 549
Query: 754 XHXPTLAPPRA 786
APP A
Sbjct: 550 GIPGATAPPGA 560
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +1
Query: 655 PGP-SXAXPPPXTPSXPGXPPPPXHXXXXXPXRPXHXPTLAPPRA 786
P P S PP P P PPP P + P+ PP A
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +3
Query: 588 APXGXPXXPERXPXSRXRRXXRPRPLXGT-APPSHPLXPRAXXPPPXXXPPXTL 746
+P P P + P +P +PPS P P A P P PP L
Sbjct: 153 SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +1
Query: 577 PXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXPPPXTPSXPGXPPP 717
P SAP P P P PS PPP P+ P PP
Sbjct: 140 PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSL-PPPAQPAAPVKSPP 185
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/81 (24%), Positives = 25/81 (30%)
Frame = +1
Query: 511 PRTXXXPIXXRTTXLXPXAR*XPXSAPXXAXRXXPKDXPXPXXXGXXGPGPSXAXPPPXT 690
P P+ TT + P + P P A + P P GPG + PPP
Sbjct: 237 PPVPNVPLVGATTAVPPLS--IPNVLPFTAAQHFPGMPAMPMMNVPMGPGGAPLVPPPPP 294
Query: 691 PSXPGXPPPPXHXXXXXPXRP 753
P P P P
Sbjct: 295 GMVMASPSPAAATIPGAPVMP 315
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 982 PXQXPPPPXPPP 1017
P PPPP PPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 994 PPPPXPPPXRXAG 1032
PPPP PP AG
Sbjct: 947 PPPPPPPLVSAAG 959
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 661 PSXAXPPPXTPSXPGX-PPPPXHXXXXXPXRPXHXPTLAPPR 783
P+ P TP+ P PPPP RP P+L PPR
Sbjct: 402 PTSNVPAYSTPARPTESPPPPPISSSSTTPRPDDKPSL-PPR 442
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,781,941
Number of Sequences: 5004
Number of extensions: 18484
Number of successful extensions: 257
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 619568602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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