Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P07
         (1157 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.048
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.5 bits (68), Expect = 0.048
 Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = +1

Query: 958  PXGXPPXAPXQXPPPPXPPPXRXAGXXL---QTAXPXPPHXXGQAPGXPP 1098
            P   PP AP   PPP  PPP   AG  L     + P  P+  G     PP
Sbjct: 577  PNAQPPPAP-PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 26.2 bits (55), Expect = 1.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 958  PXGXPPXAPXQXPPPPXPPP 1017
            P G P     Q PP P PPP
Sbjct: 570  PAGFPNLPNAQPPPAPPPPP 589



 Score = 25.0 bits (52), Expect = 4.2
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +1

Query: 655 PGPSXAXPPPXTPSXPGXPPPP 720
           P    A PPP  P  P   PPP
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPP 595


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 17/45 (37%), Positives = 18/45 (40%)
 Frame = -2

Query: 736 GGXXXGGGXXALGXRGXEGGAVPXRGRGLXXRRXREXGXLSGXXG 602
           GG   G      G RG  GG    RGRG   R  R+ G   G  G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRG-RGRGGRDGGGGFGGGG 98


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 25/91 (27%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
 Frame = +1

Query: 448 VXPLRTHXPCXPXP*CXPAXSPRTXXXPIXXRTTXLXPXAR*XPXSAPXXAXRXXPKDXP 627
           V P RT  P  P P       P+    P+  R           P + P       P+   
Sbjct: 198 VGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQM-------PPGAVPGMQPGMQPRP-- 248

Query: 628 XPXXXGXXGPGPSXAXPPPXTPSXP-GXPPP 717
            P   G   P P    PPP  P  P G P P
Sbjct: 249 -PSAQGMQRP-PMMGQPPPIRPPNPMGGPRP 277


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 536,232
Number of Sequences: 2352
Number of extensions: 6639
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 130390293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)