Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P03
         (1068 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7CQZ2 Cluster: Putative uncharacterized protein; n=1; ...    34   7.2  
UniRef50_A5YT37 Cluster: Probable cell surface glycoprotein; n=1...    34   7.2  
UniRef50_Q4L301 Cluster: Similarity; n=1; Staphylococcus haemoly...    33   9.5  
UniRef50_Q0LR31 Cluster: Putative uncharacterized protein; n=2; ...    33   9.5  
UniRef50_Q9FI79 Cluster: Arabidopsis thaliana genomic DNA, chrom...    33   9.5  

>UniRef50_A7CQZ2 Cluster: Putative uncharacterized protein; n=1;
            Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
            protein - Opitutaceae bacterium TAV2
          Length = 388

 Score = 33.9 bits (74), Expect = 7.2
 Identities = 20/67 (29%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
 Frame = +3

Query: 846  PXTTSHNNLXPPPXXXNPHIPXXXPPKTXPXNSPXNPXKHSHXTTXXQI--PNXQXPXXN 1019
            P   SH    PPP       P   PP   P  SP     + H TT   +   N Q P  N
Sbjct: 37   PPAASHRPTSPPPRRMTTSSPKPRPPPFPPTKSPAFSASNHHPTTHAAMIAINIQRPTSN 96

Query: 1020 XHQTXHK 1040
              +   K
Sbjct: 97   TQRPIKK 103


>UniRef50_A5YT37 Cluster: Probable cell surface glycoprotein; n=1;
            uncultured haloarchaeon|Rep: Probable cell surface
            glycoprotein - uncultured haloarchaeon
          Length = 3077

 Score = 33.9 bits (74), Expect = 7.2
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +1

Query: 883  PXXXTPTSPXXNPPKHXXQTPHXTPXNTPIXXHXNKSXXXKXPQXTPT-KPXTXXGGGGX 1059
            P   TPT    + P+    TP  T   TP     + S   + P  TP   P +  GGG  
Sbjct: 2793 PITSTPTPTPTSTPRTPTSTPTPTSTPTPTPTPTSTSTT-ETPTSTPALPPSSGGGGGSG 2851

Query: 1060 GGG 1068
            GGG
Sbjct: 2852 GGG 2854


>UniRef50_Q4L301 Cluster: Similarity; n=1; Staphylococcus haemolyticus
            JCSC1435|Rep: Similarity - Staphylococcus haemolyticus
            (strain JCSC1435)
          Length = 1220

 Score = 33.5 bits (73), Expect = 9.5
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +1

Query: 880  PPXXXTPTSPXXNPPKHXXQTPHXTPXNTP 969
            PP   TP  P  NPPK   Q P   P N P
Sbjct: 1128 PPVPPTPNKPPHNPPKTPGQPPVNPPGNPP 1157


>UniRef50_Q0LR31 Cluster: Putative uncharacterized protein; n=2;
            Herpetosiphon aurantiacus ATCC 23779|Rep: Putative
            uncharacterized protein - Herpetosiphon aurantiacus ATCC
            23779
          Length = 382

 Score = 33.5 bits (73), Expect = 9.5
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +1

Query: 880  PPXXXTPTSPXXNPPKHXXQTPHXTPXNTPIXXHXNKSXXXKXPQXTPTKPXT 1038
            P    TPT+   N P    +TP  TP NTP       S     P  TPT+  T
Sbjct: 265  PTETPTPTNTPTNTPT---ETPTNTPTNTPTNTPTETSTPTNTPTNTPTETPT 314


>UniRef50_Q9FI79 Cluster: Arabidopsis thaliana genomic DNA, chromosome
            5, TAC clone:K19E20; n=1; Arabidopsis thaliana|Rep:
            Arabidopsis thaliana genomic DNA, chromosome 5, TAC
            clone:K19E20 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 205

 Score = 33.5 bits (73), Expect = 9.5
 Identities = 16/66 (24%), Positives = 24/66 (36%)
 Frame = +3

Query: 828  QXPXKTPXTTSHNNLXPPPXXXNPHIPXXXPPKTXPXNSPXNPXKHSHXTTXXQIPNXQX 1007
            Q P  +P     +++ PPP   +P      P  + P   P +P  H H       P+   
Sbjct: 17   QHPLPSPVPPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQ 76

Query: 1008 PXXNXH 1025
            P    H
Sbjct: 77   PPPPPH 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,755,373
Number of Sequences: 1657284
Number of extensions: 3091967
Number of successful extensions: 25233
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23134
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 102868292879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)