Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P03
         (1068 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028964-1|BAA82993.2|  642|Homo sapiens KIAA1041 protein protein.     33   1.8  
AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein pr...    31   9.5  
AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.              31   9.5  

>AB028964-1|BAA82993.2|  642|Homo sapiens KIAA1041 protein protein.
          Length = 642

 Score = 33.1 bits (72), Expect = 1.8
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = +3

Query: 858  SHNNLXPPPXXXNPHIPXXXPPKTXPXNSPXNPXKHSHXTTXXQIPNXQXPXXNXHQTXH 1037
            SH  + P P    PH P   P    P  SP +P  H    +  Q P+ Q P  + H   H
Sbjct: 391  SHPQMHPQPSPHPPHRPHGLP--QHPQRSP-HPAPHPQQHSQLQSPHPQHPSPHQHIQHH 447


>AL137724-1|CAB70894.1|  439|Homo sapiens hypothetical protein
           protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 876 PPPXXXNPHIPXXXPP---KTXPXNSPXNPXKHSH 971
           PPP    PH P   PP   +  P + P +P +H H
Sbjct: 45  PPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQH 79


>AC078834-1|AAS01989.1|  439|Homo sapiens unknown protein.
          Length = 439

 Score = 30.7 bits (66), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 876 PPPXXXNPHIPXXXPP---KTXPXNSPXNPXKHSH 971
           PPP    PH P   PP   +  P + P +P +H H
Sbjct: 45  PPPQHQPPHQPPHQPPPQHQPPPQHPPQHPPQHQH 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,639,965
Number of Sequences: 237096
Number of extensions: 554493
Number of successful extensions: 4525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4233
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14594798064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)