Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P02
         (1106 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.0  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    25   5.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = -2

Query: 412 GXGGGGXXGXXXGFXXGXXGX*XXXGGGXXEG 317
           G GGGG  G   G   G  G     GGG   G
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.0
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = +2

Query: 335 PXTPSXSXXPXXKPXXPPXXPPPPXPP 415
           P  P+    P   P  P   PPP  PP
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPP 587



 Score = 25.0 bits (52), Expect = 4.0
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +3

Query: 318 PSXXPPPQXXHXPXXPXXNPLXXPXXPPPPXP 413
           P+  PPP     P      PL  P    PP P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.6 bits (51), Expect = 5.3
 Identities = 12/39 (30%), Positives = 14/39 (35%)
 Frame = +3

Query: 318 PSXXPPPQXXHXPXXPXXNPLXXPXXPPPPXPXXXTXPP 434
           P+   PP+    P  P   PL      P P P     PP
Sbjct: 81  PTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPP 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.140    0.466 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,329
Number of Sequences: 2352
Number of extensions: 6447
Number of successful extensions: 54
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 124562997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)