Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P01
         (921 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   3.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   5.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   7.7  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 282 VQLVKIILEYIFSHFVP*VVAGKRLLLAKKPSIIVIAHLICCYLFH 419
           +QL K + +Y+    V   + G  L+L     I+ ++H +   L H
Sbjct: 93  IQLPKHVDQYLLEQLVCEQLGGFLLILTPNGKIVFVSHTVEHLLGH 138


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/46 (19%), Positives = 23/46 (50%)
 Frame = +3

Query: 183 CYFLTLFAKKYNNFCRILNILVRL*GKVCCGHGVQLVKIILEYIFS 320
           CY L    K YN+ C +++    + G       ++++ +++ Y+ +
Sbjct: 216 CYDLRRVRKNYNSICELVDAFNNIYGLAM----LEIIIVVITYVLN 257


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 617 FHKLLYKSIHNLCFAFPHSILS 552
           FH L  + +H LC  F H  +S
Sbjct: 156 FHLLELEKVHELCDNFCHRYIS 177


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +3

Query: 189 FLTLFAK-KYNNFCRILNILV 248
           +L ++ K KY  FCRIL   +
Sbjct: 25  YLKIYHKEKYRKFCRILKYFI 45


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -1

Query: 129 AHSVHHDXPGSDFLVMTGYPQWPIS 55
           AH+V    P    +   G+PQWP +
Sbjct: 60  AHTVLIPQPLHPSVPRLGHPQWPFA 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,203
Number of Sequences: 336
Number of extensions: 4057
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25754817
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)