Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_P01
         (921 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1372 + 33008740-33009130,33009485-33011544                       30   3.0  
11_01_0520 + 4078075-4078198,4078726-4078957,4079068-4079147,407...    29   5.2  
07_03_0862 + 22075395-22075714,22075716-22076307                       29   6.9  
05_03_0009 - 7342164-7342709,7343036-7343179,7343324-7343500           29   6.9  
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120...    28   9.1  

>04_04_1372 + 33008740-33009130,33009485-33011544
          Length = 816

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = +2

Query: 278 WSSTC*NHFRIYIFTFCTLSCCWEEIAFSEKT 373
           WS  C NHFR  IF +     C+EE  FS +T
Sbjct: 614 WSLICENHFRYPIFDYIG---CYEERGFSFRT 642


>11_01_0520 +
           4078075-4078198,4078726-4078957,4079068-4079147,
           4079256-4079409,4079438-4079494,4080733-4080811,
           4081013-4081094,4081168-4081223,4081310-4081492
          Length = 348

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 201 FAKKYNNFCRILNILVRL*GKVCCGHGVQLVKIILEYIFSH 323
           FAK +N+  R LN+L+   G + C  G+    I L++  +H
Sbjct: 104 FAKSFNSSYRHLNVLINNAGVMSCPFGLSKDGIELQFATNH 144


>07_03_0862 + 22075395-22075714,22075716-22076307
          Length = 303

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/44 (25%), Positives = 25/44 (56%)
 Frame = +2

Query: 305 RIYIFTFCTLSCCWEEIAFSEKTIYYCDCTSNLLLFISFFQADK 436
           ++++F F + S  W +++    +I+  D  S++L+   FF A +
Sbjct: 87  KLFVFVFSSRSEEWRKLSIRHGSIFAADVNSSVLVQADFFLAPR 130


>05_03_0009 - 7342164-7342709,7343036-7343179,7343324-7343500
          Length = 288

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 299 DFNKLNSMSTAYFSLEPNQYIKNPTKIVVFFCKQCQKIT 183
           D+N   +   AYF ++PN+Y  NP   +    +  Q++T
Sbjct: 193 DYNAFFNPQYAYFGIQPNEYF-NPVLAINTLSESIQRLT 230


>04_04_1571 + 34504087-34504421,34505002-34505731,34506091-34512077,
            34512493-34513964,34514114-34514377,34514761-34514978,
            34515759-34516030,34516190-34516559,34516578-34516797,
            34516819-34518931,34518941-34519193,34519269-34519401,
            34520597-34521114,34521207-34522115,34522195-34522368,
            34522833-34522882,34523963-34524035,34524413-34524477,
            34524736-34525522,34525622-34525878,34525989-34526109,
            34526315-34526956
          Length = 5320

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +3

Query: 9    PPPGEFXGNPLTYGLG---*WAIADTLSL 86
            PPP +  GN L YGLG    + + DTLS+
Sbjct: 2869 PPPWKLKGNILNYGLGLLSSYFVCDTLSI 2897


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,741,752
Number of Sequences: 37544
Number of extensions: 342315
Number of successful extensions: 679
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)