Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_O24
(936 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1314 + 29266320-29266346,29266463-29266556,29266663-292667... 150 1e-36
05_07_0148 + 28024820-28025293,28025655-28025702,28026034-280260... 66 3e-11
03_06_0493 + 34315867-34316124,34316194-34316256,34317346-343176... 29 0.045
08_02_0010 - 11230407-11232416 31 1.00
08_02_0009 + 11216532-11218687,11220727-11225998 31 1.00
08_02_0006 + 11204835-11206382 31 1.00
08_02_0003 + 11180421-11180757,11180773-11185715 31 1.00
08_02_0002 + 11173365-11173512,11173528-11178470 31 1.00
08_01_1086 - 11150017-11151564 31 1.00
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 31 1.7
08_02_1514 + 27636127-27636834 30 2.3
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 30 3.0
11_01_0245 + 1884361-1884400,1884549-1885282 28 9.3
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 28 9.3
02_02_0537 + 11308195-11309667 28 9.3
>06_03_1314 +
29266320-29266346,29266463-29266556,29266663-29266712,
29266798-29266847,29266945-29267053,29267135-29267195,
29267291-29267343,29267629-29267721,29268091-29268166,
29268401-29268508,29268596-29268840
Length = 321
Score = 150 bits (364), Expect = 1e-36
Identities = 78/127 (61%), Positives = 89/127 (70%), Gaps = 4/127 (3%)
Frame = +3
Query: 459 MAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLA 638
MA + GV Q+QGDIT TA +I F G KADLVVCDGAPDVTGLHD+DE+VQSQL+LA
Sbjct: 89 MAPIEGVIQVQGDITNARTAEVVIRHFDGCKADLVVCDGAPDVTGLHDMDEFVQSQLILA 148
Query: 639 ALNITTHVLKNGGTFVAXIFRGKD---VXC-CTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
AL I THVLK GG FVA IFRGKD + C C F + + KP+SSRNSSIEA
Sbjct: 149 ALTIVTHVLKVGGKFVAKIFRGKDTSLLYCQCFMQLKLFFSQVTFAKPKSSRNSSIEAFA 208
Query: 807 FAKNTSP 827
+N SP
Sbjct: 209 VCENYSP 215
Score = 123 bits (297), Expect = 2e-28
Identities = 63/94 (67%), Positives = 71/94 (75%), Gaps = 6/94 (6%)
Frame = +2
Query: 212 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLT 391
MGK SKDKRDIYYR AKEEGWRARSAFKLLQ ++E+NIF+GV R VDLCAAPGSWSQVL+
Sbjct: 1 MGKASKDKRDIYYRKAKEEGWRARSAFKLLQIDQEFNIFHGVKRVVDLCAAPGSWSQVLS 60
Query: 392 KNLRQNAVNTEDVK------IVAVDLQGDGSITG 475
+NL A + D K IVA+DLQ I G
Sbjct: 61 RNLYVPAKQSPDCKEGDLPLIVAIDLQPMAPIEG 94
>05_07_0148 +
28024820-28025293,28025655-28025702,28026034-28026080,
28026334-28026496,28026595-28026656,28026820-28027003,
28027093-28027182,28027553-28027686,28027747-28027936,
28028103-28029033,28029860-28030065
Length = 842
Score = 66.5 bits (155), Expect = 3e-11
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +2
Query: 212 MGKTS-KDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVL 388
MGKT K ++D +Y LAKE+G+R+R+AFKLLQ + + +DLCAAPG W QV
Sbjct: 1 MGKTKGKQRQDKFYHLAKEQGYRSRAAFKLLQLDARFRFLPTARAVLDLCAAPGGWVQVA 60
Query: 389 TKNLRQNAVNTEDVKIVAV-DLQGDGSITGSETNSR 493
+ A V +V + ++G S+T T ++
Sbjct: 61 VNHAPVGAF-VVGVDLVPIRPIRGAHSLTEDITTTK 95
Score = 41.5 bits (93), Expect = 0.001
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 474 GVKQIQGDITKQETANAI--IEEFQGLKA-DLVVCDGAPDVTGLHDIDEYVQSQLLLAAL 644
G + DIT + A+ + + G+ A D+V+ DG+P+V G + QS L++ A+
Sbjct: 83 GAHSLTEDITTTKCRAAVRRLMDSNGVAAFDVVLHDGSPNVGGAWAQEATAQSSLVIDAV 142
Query: 645 NITTHVLKNGGTFVAXIFRGKD 710
+ T L G F+ +FR +D
Sbjct: 143 RLATMFLAPKGAFITKVFRSQD 164
>03_06_0493 +
34315867-34316124,34316194-34316256,34317346-34317604,
34317710-34317819
Length = 229
Score = 29.1 bits (62), Expect(2) = 0.045
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 293 KLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNL 400
+L+Q +++ + +DL APG+W QV +NL
Sbjct: 57 QLIQIQKQHKLIAPGAAVLDLGCAPGAWLQVACQNL 92
Score = 25.8 bits (54), Expect(2) = 0.045
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 239 DIYYRLAKEEGWRARSAFKL 298
D +YR A+ G+ ARSAFK+
Sbjct: 9 DFFYREAQRLGYVARSAFKV 28
>08_02_0010 - 11230407-11232416
Length = 669
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 540 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 576
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 2346 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 2382
>08_02_0006 + 11204835-11206382
Length = 515
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 386 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 422
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 1630 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 1666
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 1567 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 1603
>08_01_1086 - 11150017-11151564
Length = 515
Score = 31.5 bits (68), Expect = 1.00
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E + K S ++ +IY +A E WR
Sbjct: 386 YIYIMKGQFNFQEDGLSKLSDEEEEIYTTVANHENWR 422
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 446 DLQGDGSITGSETNSRGYYQTRNSKCYNRRVPRPQSRF 559
D+ GDG+ T + T+S G R S+ + R+ +PQ F
Sbjct: 503 DVDGDGTTTTTTTSSNGGSGKRTSRKCSVRISKPQGAF 540
>08_02_1514 + 27636127-27636834
Length = 235
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +2
Query: 365 PGSWSQVLTKNLRQNAVNTEDVKIVAVDLQGDGSITGSETNSRGYYQTRNS 517
P WS +++K+ ++ V+ E+V++ A++L G +G+E R QTR S
Sbjct: 179 PSKWS-LISKSFQKAKVSCEEVQLQALELGIVGLESGAENLFRRLIQTRAS 228
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+K +F E K S ++ +IY +A E WR
Sbjct: 987 YIYIMKGQFNFQEDGPSKLSDEEEEIYTTVANHENWR 1023
>11_01_0245 + 1884361-1884400,1884549-1885282
Length = 257
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 452 QGDGSITGSETNSRGYYQTRNSKCYNR 532
Q SI+G + NS GY Q RNS+ N+
Sbjct: 222 QDPSSISGRKRNSGGYIQQRNSRQRNQ 248
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+ +F E K S ++ +IY +A E WR
Sbjct: 1228 YIYIMNGQFNFQEDGPSKLSDEEEEIYTTIANHENWR 1264
>02_02_0537 + 11308195-11309667
Length = 490
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 167 FLIILKS*ISFVEKNMGKTSKDKRDIYYRLAKEEGWR 277
++ I+ +F E K S ++ +IY +A E WR
Sbjct: 386 YIYIMNGQFNFQEDGPSKLSDEEEEIYTTIANHENWR 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,668,065
Number of Sequences: 37544
Number of extensions: 402456
Number of successful extensions: 909
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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