Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_O24
(936 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli... 161 3e-39
AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein. 161 3e-39
AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein p... 161 3e-39
BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli... 71 5e-12
AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens ... 71 5e-12
AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB... 71 5e-12
BC114514-1|AAI14515.1| 246|Homo sapiens FtsJ homolog 2 (E. coli... 60 1e-08
BC114564-1|AAI14565.1| 240|Homo sapiens FTSJ2 protein protein. 60 2e-08
AF093415-1|AAF22488.1| 246|Homo sapiens cell division protein F... 60 2e-08
BC000131-1|AAH00131.2| 734|Homo sapiens FTSJ3 protein protein. 48 4e-05
D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein. 36 0.28
BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein. 36 0.28
AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein. 36 0.28
AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein. 36 0.28
Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription fa... 33 1.1
BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB sy... 33 1.1
AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein. 33 1.1
AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protei... 33 1.1
AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protei... 33 1.1
AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney ... 33 1.1
AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney ... 33 1.1
AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney ... 33 1.1
AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar is... 33 1.1
AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein pro... 33 1.1
>BC023584-1|AAH23584.1| 329|Homo sapiens FtsJ homolog 1 (E. coli)
protein.
Length = 329
Score = 161 bits (392), Expect = 3e-39
Identities = 83/139 (59%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
Frame = +3
Query: 453 RAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLL 632
+AMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY+Q+QLL
Sbjct: 77 QAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLL 136
Query: 633 LAALNITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
LAALNI THVLK GG FVA IFRG+DV F + KPRSSRNSSIEA
Sbjct: 137 LAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVC 196
Query: 813 KNTSPXK-YLPNMVQXLLN 866
+ P + ++P++ + LL+
Sbjct: 197 QGYDPPEGFIPDLSKPLLD 215
Score = 115 bits (276), Expect = 3e-25
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +2
Query: 212 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLT 391
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ ++E+ +F GV RAVDLCAAPGSWSQVL+
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 392 KNLRQNAVNTEDVKIVAVDLQGDGSITG 475
+ + +VAVDLQ + G
Sbjct: 61 QKIGGQGSG----HVVAVDLQAMAPLPG 84
>AJ005892-1|CAA06749.1| 329|Homo sapiens JM23 protein.
Length = 329
Score = 161 bits (392), Expect = 3e-39
Identities = 83/139 (59%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
Frame = +3
Query: 453 RAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLL 632
+AMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY+Q+QLL
Sbjct: 77 QAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLL 136
Query: 633 LAALNITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
LAALNI THVLK GG FVA IFRG+DV F + KPRSSRNSSIEA
Sbjct: 137 LAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVC 196
Query: 813 KNTSPXK-YLPNMVQXLLN 866
+ P + ++P++ + LL+
Sbjct: 197 QGYDPPEGFIPDLSKPLLD 215
Score = 115 bits (276), Expect = 3e-25
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +2
Query: 212 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLT 391
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ ++E+ +F GV RAVDLCAAPGSWSQVL+
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 392 KNLRQNAVNTEDVKIVAVDLQGDGSITG 475
+ + +VAVDLQ + G
Sbjct: 61 QKIGGQGSG----HVVAVDLQAMAPLPG 84
>AF063015-1|AAC33734.1| 327|Homo sapiens cell division protein
protein.
Length = 327
Score = 161 bits (392), Expect = 3e-39
Identities = 83/139 (59%), Positives = 100/139 (71%), Gaps = 1/139 (0%)
Frame = +3
Query: 453 RAMAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLL 632
+AMA LPGV QIQGDIT+ TA II+ F+G ADLVVCDGAPDVTGLHD+DEY+Q+QLL
Sbjct: 77 QAMAPLPGVVQIQGDITQLSTAKEIIQHFKGCPADLVVCDGAPDVTGLHDVDEYMQAQLL 136
Query: 633 LAALNITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
LAALNI THVLK GG FVA IFRG+DV F + KPRSSRNSSIEA
Sbjct: 137 LAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFAVC 196
Query: 813 KNTSPXK-YLPNMVQXLLN 866
+ P + ++P++ + LL+
Sbjct: 197 QGYDPPEGFIPDLSKPLLD 215
Score = 115 bits (276), Expect = 3e-25
Identities = 55/88 (62%), Positives = 66/88 (75%)
Frame = +2
Query: 212 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLT 391
MG+TSKDKRD+YYRLAKE GWRARSAFKLLQ ++E+ +F GV RAVDLCAAPGSWSQVL+
Sbjct: 1 MGRTSKDKRDVYYRLAKENGWRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLS 60
Query: 392 KNLRQNAVNTEDVKIVAVDLQGDGSITG 475
+ + +VAVDLQ + G
Sbjct: 61 QKIGGQGSG----HVVAVDLQAMAPLPG 84
>BC036710-1|AAH36710.1| 847|Homo sapiens FtsJ homolog 3 (E. coli)
protein.
Length = 847
Score = 71.3 bits (167), Expect = 5e-12
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = +2
Query: 215 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTK 394
GK K +RD +Y LAKE G+R+RSAFKL+Q N + +DLCAAPG W QV K
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAK 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +3
Query: 468 LPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALN 647
LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y Q+ L L AL
Sbjct: 83 LPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALR 142
Query: 648 ITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
+ L GG+F+ +FR +D Q KP++SR+ S E V
Sbjct: 143 LACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFV 195
>AK027463-1|BAB55128.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ14557 fis, clone NT2RM2001896, weakly similar to
CELL DIVISION PROTEIN FTSJ. ).
Length = 493
Score = 71.3 bits (167), Expect = 5e-12
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = +2
Query: 215 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTK 394
GK K +RD +Y LAKE G+R+RSAFKL+Q N + +DLCAAPG W QV K
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAK 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +3
Query: 468 LPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALN 647
LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y Q+ L L AL
Sbjct: 83 LPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALR 142
Query: 648 ITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
+ L GG+F+ +FR +D Q KP++SR+ S E V
Sbjct: 143 LACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFV 195
>AF327355-1|AAL56015.1| 847|Homo sapiens hypothetical protein SB92
protein.
Length = 847
Score = 71.3 bits (167), Expect = 5e-12
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = +2
Query: 215 GKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTK 394
GK K +RD +Y LAKE G+R+RSAFKL+Q N + +DLCAAPG W QV K
Sbjct: 5 GKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAK 64
Score = 68.1 bits (159), Expect = 4e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +3
Query: 468 LPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALN 647
LP V +Q DIT + A+ +E + K D+V+ DGAP+V D Y Q+ L L AL
Sbjct: 83 LPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALR 142
Query: 648 ITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
+ L GG+F+ +FR +D Q KP++SR+ S E V
Sbjct: 143 LACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFV 195
>BC114514-1|AAI14515.1| 246|Homo sapiens FtsJ homolog 2 (E. coli)
protein.
Length = 246
Score = 60.1 bits (139), Expect = 1e-08
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 236 RDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQNAV 415
RD + + AK E +R RSAFKLL+ NE + I LR +D AAPG+WSQV + + NA
Sbjct: 40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPSLRVLDCGAAPGAWSQVAVQKV--NAA 97
Query: 416 NTE 424
T+
Sbjct: 98 GTD 100
Score = 56.8 bits (131), Expect = 1e-07
Identities = 32/106 (30%), Positives = 49/106 (46%)
Frame = +3
Query: 495 DITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNG 674
D+T T+ I+E G +AD+++ D AP+ TG D+D L L L++T +L+ G
Sbjct: 129 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 188
Query: 675 GTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
GTF+ + G + KP +SR S E A
Sbjct: 189 GTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLA 234
>BC114564-1|AAI14565.1| 240|Homo sapiens FTSJ2 protein protein.
Length = 240
Score = 59.7 bits (138), Expect = 2e-08
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 236 RDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQNAV 415
RD + + AK E +R RSAFKLL+ NE + I LR +D AAPG+WSQV + + NA
Sbjct: 34 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKV--NAA 91
Query: 416 NTE 424
T+
Sbjct: 92 GTD 94
Score = 56.8 bits (131), Expect = 1e-07
Identities = 32/106 (30%), Positives = 49/106 (46%)
Frame = +3
Query: 495 DITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNG 674
D+T T+ I+E G +AD+++ D AP+ TG D+D L L L++T +L+ G
Sbjct: 123 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 182
Query: 675 GTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
GTF+ + G + KP +SR S E A
Sbjct: 183 GTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLA 228
>AF093415-1|AAF22488.1| 246|Homo sapiens cell division protein FtsJ
protein.
Length = 246
Score = 59.7 bits (138), Expect = 2e-08
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +2
Query: 236 RDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQNAV 415
RD + + AK E +R RSAFKLL+ NE + I LR +D AAPG+WSQV + + NA
Sbjct: 40 RDPFVKAAKVESYRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKV--NAA 97
Query: 416 NTE 424
T+
Sbjct: 98 GTD 100
Score = 56.8 bits (131), Expect = 1e-07
Identities = 32/106 (30%), Positives = 49/106 (46%)
Frame = +3
Query: 495 DITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNG 674
D+T T+ I+E G +AD+++ D AP+ TG D+D L L L++T +L+ G
Sbjct: 129 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 188
Query: 675 GTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFA 812
GTF+ + G + KP +SR S E A
Sbjct: 189 GTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRKESSEVYFLA 234
>BC000131-1|AAH00131.2| 734|Homo sapiens FTSJ3 protein protein.
Length = 734
Score = 48.4 bits (110), Expect = 4e-05
Identities = 28/82 (34%), Positives = 39/82 (47%)
Frame = +3
Query: 561 VVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNGGTFVAXIFRGKDVXCCTHX*NS 740
V+ DGAP+V D Y Q+ L L AL + L GG+F+ +FR +D
Sbjct: 1 VLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQ 60
Query: 741 FLNL*QYPKPRSSRNSSIEALV 806
Q KP++SR+ S E V
Sbjct: 61 LFRRVQATKPQASRHESAEIFV 82
>D43949-1|BAA07893.2| 882|Homo sapiens KIAA0082 protein.
Length = 882
Score = 35.5 bits (78), Expect = 0.28
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 492 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 659
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 381 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 440
Query: 660 VLKNGGTFVAXIF 698
+++ GG F+ F
Sbjct: 441 IVRTGGHFICKTF 453
>BC031890-1|AAH31890.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 35.5 bits (78), Expect = 0.28
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 492 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 659
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 334 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 393
Query: 660 VLKNGGTFVAXIF 698
+++ GG F+ F
Sbjct: 394 IVRTGGHFICKTF 406
>AL353597-2|CAI19603.1| 835|Homo sapiens KIAA0082 protein.
Length = 835
Score = 35.5 bits (78), Expect = 0.28
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 492 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 659
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 334 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 393
Query: 660 VLKNGGTFVAXIF 698
+++ GG F+ F
Sbjct: 394 IVRTGGHFICKTF 406
>AL353597-1|CAI19602.1| 372|Homo sapiens KIAA0082 protein.
Length = 372
Score = 35.5 bits (78), Expect = 0.28
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 492 GDITKQETANA----IIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTH 659
GDIT+ E +A +++ ++ DG V G ++ E + QLLL +
Sbjct: 278 GDITRPENISAFRNFVLDNTDRKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALS 337
Query: 660 VLKNGGTFVAXIF 698
+++ GG F+ F
Sbjct: 338 IVRTGGHFICKTF 350
>Y13667-1|CAA74018.1| 667|Homo sapiens putative transcription
factor XPRF protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>BC053626-1|AAH53626.1| 667|Homo sapiens midline 1 (Opitz/BBB
syndrome) protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF269101-1|AAG33130.1| 667|Homo sapiens midline 1 protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF230977-1|AAG50192.1| 552|Homo sapiens tripartite motif protein
TRIM18 beta protein.
Length = 552
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF230976-1|AAG50191.1| 667|Homo sapiens tripartite motif protein
TRIM18 alpha protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF041210-1|AAC33002.1| 630|Homo sapiens midline 1 fetal kidney
isoform 3 protein.
Length = 630
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 366 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 409
>AF041209-1|AAC33001.1| 667|Homo sapiens midline 1 fetal kidney
isoform 2 protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF041208-1|AAC33000.1| 667|Homo sapiens midline 1 fetal kidney
isoform 1 protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF041206-1|AAC32998.1| 484|Homo sapiens midline 1 cerebellar
isoform 1 protein.
Length = 484
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
>AF035360-1|AAB99951.1| 667|Homo sapiens ring finger protein
protein.
Length = 667
Score = 33.5 bits (73), Expect = 1.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 272 WRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQN 409
W + F ++ +Y IF G V LC + SW ++ N++QN
Sbjct: 403 WTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSW--MIVPNIKQN 446
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,791,918
Number of Sequences: 237096
Number of extensions: 2326504
Number of successful extensions: 3834
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3828
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12270013262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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