Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_O24
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical pr... 138 4e-33
AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical ... 74 1e-13
AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical ... 74 1e-13
AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical ... 74 1e-13
Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical pr... 49 6e-06
AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical... 35 0.096
Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical pr... 34 0.17
AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical ... 31 1.6
Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF003740-3|AAC48137.2| 365|Caenorhabditis elegans Eukaryotic in... 29 4.8
>Z36238-6|CAA85279.2| 337|Caenorhabditis elegans Hypothetical
protein R74.7 protein.
Length = 337
Score = 138 bits (335), Expect = 4e-33
Identities = 66/131 (50%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Frame = +3
Query: 459 MAALPGVKQIQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLA 638
MA +PGV Q+QGDIT +TAN +I+ F G K+D+V+CDGAPDVTG+H +DE++Q++L+LA
Sbjct: 80 MAPIPGVIQLQGDITSVDTANQVIKHFSGEKSDIVICDGAPDVTGIHSLDEFMQAELILA 139
Query: 639 ALNITTHVLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFAKN 818
A NIT+HVLK GG F+A IFR ++ + KPRSSR SS EA V +
Sbjct: 140 AFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCLD 199
Query: 819 TSPXK-YLPNM 848
SP + ++P M
Sbjct: 200 YSPPEGFVPTM 210
Score = 119 bits (286), Expect = 3e-27
Identities = 58/88 (65%), Positives = 68/88 (77%)
Frame = +2
Query: 212 MGKTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLT 391
MGKTS+DKRDIYYRLAKE WRARSAFKL+Q ++E+ I GV RAVDLCAAPGSWSQVL+
Sbjct: 1 MGKTSRDKRDIYYRLAKENKWRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLS 60
Query: 392 KNLRQNAVNTEDVKIVAVDLQGDGSITG 475
K L + ++ KIVA+DLQ I G
Sbjct: 61 KRLYE---EDQEAKIVAIDLQPMAPIPG 85
>AC006651-8|AAX22286.1| 716|Caenorhabditis elegans Hypothetical
protein H06I04.3b protein.
Length = 716
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 486 IQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DEYVQSQLLLAALNITTHV 662
+QGDIT ET AI +E + AD V+ DGAP+V GL+ + D + Q+ L L+AL + T +
Sbjct: 89 LQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDAFQQNCLTLSALKLATQI 147
Query: 663 LKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
L+ GGTFV +FR D C KP +SR S E V
Sbjct: 148 LRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFV 195
Score = 71.7 bits (168), Expect = 7e-13
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +2
Query: 218 KTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKN 397
K K +RD YY+LAKE G+R+R+AFKL+Q N+ + VDLCAAPG W QV ++
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQF 65
Query: 398 LRQNA----VNTEDVKIVAVDLQGDGSITGSETNS 490
+ ++ V+ +K + + G IT +ET +
Sbjct: 66 MPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRA 100
>AC006651-7|AAX22287.1| 786|Caenorhabditis elegans Hypothetical
protein H06I04.3c protein.
Length = 786
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 486 IQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DEYVQSQLLLAALNITTHV 662
+QGDIT ET AI +E + AD V+ DGAP+V GL+ + D + Q+ L L+AL + T +
Sbjct: 89 LQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDAFQQNCLTLSALKLATQI 147
Query: 663 LKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
L+ GGTFV +FR D C KP +SR S E V
Sbjct: 148 LRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFV 195
Score = 71.7 bits (168), Expect = 7e-13
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +2
Query: 218 KTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKN 397
K K +RD YY+LAKE G+R+R+AFKL+Q N+ + VDLCAAPG W QV ++
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQF 65
Query: 398 LRQNA----VNTEDVKIVAVDLQGDGSITGSETNS 490
+ ++ V+ +K + + G IT +ET +
Sbjct: 66 MPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRA 100
>AC006651-6|AAF39868.1| 833|Caenorhabditis elegans Hypothetical
protein H06I04.3a protein.
Length = 833
Score = 74.1 bits (174), Expect = 1e-13
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +3
Query: 486 IQGDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDI-DEYVQSQLLLAALNITTHV 662
+QGDIT ET AI +E + AD V+ DGAP+V GL+ + D + Q+ L L+AL + T +
Sbjct: 89 LQGDITTNETRAAIKKELKTWSADCVLHDGAPNV-GLNWVHDAFQQNCLTLSALKLATQI 147
Query: 663 LKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALV 806
L+ GGTFV +FR D C KP +SR S E V
Sbjct: 148 LRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFV 195
Score = 71.7 bits (168), Expect = 7e-13
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +2
Query: 218 KTSKDKRDIYYRLAKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKN 397
K K +RD YY+LAKE G+R+R+AFKL+Q N+ + VDLCAAPG W QV ++
Sbjct: 6 KIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQF 65
Query: 398 LRQNA----VNTEDVKIVAVDLQGDGSITGSETNS 490
+ ++ V+ +K + + G IT +ET +
Sbjct: 66 MPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRA 100
>Z93382-7|CAB07618.1| 214|Caenorhabditis elegans Hypothetical
protein F45G2.9 protein.
Length = 214
Score = 48.8 bits (111), Expect = 6e-06
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +2
Query: 257 AKEEGWRARSAFKLLQXNEEYNIFNGVLRAVDLCAAPGSWSQVLTKNLRQNAVNTEDVKI 436
A+E +RARSAFKL++ NE++ +D+ APGSW QV+ + + D++
Sbjct: 27 AREHNYRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKCPNGYASGVDLQN 86
Query: 437 V 439
V
Sbjct: 87 V 87
Score = 29.1 bits (62), Expect = 4.8
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +3
Query: 495 DITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDID-----EYVQSQLLLAALNITTH 659
DIT I E+ + D+V+ D AP+ TG + D E +S L ++
Sbjct: 100 DITDPAVKLKIREKLAHRQVDVVLSDMAPNPTGDNATDHLRLIELCRSVFRLFSVENEIE 159
Query: 660 VLKNGGTFVAXIFRGKDVXCCTHX*NSFLNL*QYPKPRSSRNSSIEALVFAKN 818
++KN G ++ I+ G + + + KP + R++S E +F +N
Sbjct: 160 LVKN-GVYLCKIWDGSARAEFVRELSDRFSTVKTVKPTACRDNSAELYLFCRN 211
>AL132949-11|CAB70104.2| 927|Caenorhabditis elegans Hypothetical
protein Y53F4B.13 protein.
Length = 927
Score = 34.7 bits (76), Expect = 0.096
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 543 GLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKNGGTFVAXIF 698
GL L++ DG V G +I E + +L L L ++ +++ GG F +F
Sbjct: 370 GLGVHLMMADGGFSVEGQENIQEILSKRLYLCQLLVSLCIVREGGNFFCKLF 421
>Z46812-1|CAA86843.1| 1405|Caenorhabditis elegans Hypothetical
protein ZK675.1 protein.
Length = 1405
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -3
Query: 655 VVMFNAASNN*DWTYSSISCKPVTSGAPSHTTKSALRPWNSSIIAFAVSCLVISP*ICFT 476
+ FN + + DW+ S I KP + + S+L +I V C+ I+P CF
Sbjct: 234 IASFNVSVHGVDWSLSDICFKPAPPSVAADSAASSL----GDVIDKIVPCIWITPIDCFW 289
Query: 475 PGNAAI 458
G+ A+
Sbjct: 290 EGSKAL 295
>AF078792-3|AAC26945.2| 635|Caenorhabditis elegans Hypothetical
protein Y40D12A.1a protein.
Length = 635
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +3
Query: 492 GDITKQETANAIIEEFQGLKADLVVCDGAPDVTGLHDIDEYVQSQLLLAALNITTHVLKN 671
GDI K I ++ G DLV DG+ + G E + S L+ A + + +L+
Sbjct: 196 GDIEKFTEEYLIKQKLAGT-FDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALKLLRR 254
Query: 672 GGTFVAXIFR 701
G + +R
Sbjct: 255 NGRLILKTYR 264
>Z72518-3|CAB63415.2| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 419 YLQHFVEDSWLKLDSNCLVLRKD 351
YL+HF++D W+ + +V RKD
Sbjct: 306 YLRHFLDDDWITANKKDVVTRKD 328
>Z49131-7|CAA88980.3| 704|Caenorhabditis elegans Hypothetical
protein ZC373.1 protein.
Length = 704
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 419 YLQHFVEDSWLKLDSNCLVLRKD 351
YL+HF++D W+ + +V RKD
Sbjct: 306 YLRHFLDDDWITANKKDVVTRKD 328
>AF003740-3|AAC48137.2| 365|Caenorhabditis elegans Eukaryotic
initiation factor protein3.H protein.
Length = 365
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = -1
Query: 843 SANIXWGMYFSQIPRLQYSNFLNS*VLDTVTSLKNCFNXEYSRXHLFL 700
+A + + F ++P + S++LN+ ++ ++ K+C + +YS H L
Sbjct: 182 AAGLTYQNMFEELPIIIKSSYLNNVLMSELSLAKSCSSDKYSTRHFDL 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,048,218
Number of Sequences: 27780
Number of extensions: 380631
Number of successful extensions: 928
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -