Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O23
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    51   1e-08
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          24   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      24   1.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.7  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   8.8  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 51.2 bits (117), Expect = 1e-08
 Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
 Frame = +2

Query: 362 EIILITGTGHGMGRETAMRFAKLGGVIVCVDINQKTNQETVDLIKEQKGKAYRFECDVTD 541
           E+ L+TG   G+G+         G  ++ +       +  V+ +K + GK    +CD+++
Sbjct: 8   EVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQCDLSN 67

Query: 542 SEAVKTLAERIRREVGDVTMLVNNAGIMPCKPLLQHGEGEIRAAFNVNVMAHLWLIQAFL 721
              +  + E + + +G + +L+NNA I     L      + +  F++N++    +IQ  L
Sbjct: 68  QNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVL 127

Query: 722 PSMMER--NHGHIVAMSSMAGV 781
             M ++  N+G IV ++  +G+
Sbjct: 128 KLMKKKGINNGIIVNINDASGL 149


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 807 LRHKFAVRXLMEALHEELGRTREIQWHQ 890
           L  +   R  +E +  +LG+T E  W++
Sbjct: 264 LHKQLMTRYFLERMSNDLGKTAEFDWNK 291


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 807 LRHKFAVRXLMEALHEELGRTREIQWHQ 890
           L  +   R  +E +  +LG+T E  W++
Sbjct: 264 LHKQLMTRYFLERMSNDLGKTAEFDWNK 291


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 642 CSMGRGRSGPPSMSMS 689
           C +   R GPPS+S+S
Sbjct: 121 CEVPESRDGPPSVSLS 136


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 593 RRLLHDGSSRPESSLPRCL 537
           R   H GSS  +S L RCL
Sbjct: 133 RAACHSGSSLTKSRLMRCL 151


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 15/65 (23%), Positives = 24/65 (36%)
 Frame = -3

Query: 751 VTVVSLHHRG*EGLDQPQMSHDIDIEGGPDLPLPMLQQRLARHDAGVVHQHGNVAYFTTD 572
           V  ++LHHRG  G   P +   + ++    + L   Q+           +  N       
Sbjct: 294 VVTLNLHHRGVRGTRVPGIVRSLVLDKLARIVLLNFQEERRSEPVEPPRRKNNCPLHCKP 353

Query: 571 PLGQS 557
            LGQS
Sbjct: 354 ELGQS 358


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,626
Number of Sequences: 438
Number of extensions: 6032
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)