Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O22
         (937 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0147 - 15099406-15099446,15100171-15100341,15101032-151011...    41   0.001
11_02_0056 + 7828453-7828717,7829425-7829427,7829658-7829912,782...    36   0.035
09_06_0270 + 21954652-21955245,21955827-21955964,21956050-219562...    29   7.0  
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595...    28   9.3  

>09_04_0147 -
           15099406-15099446,15100171-15100341,15101032-15101139,
           15101974-15102034,15102126-15102266
          Length = 173

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
 Frame = +1

Query: 79  RHKIICLQNDHKKVMQLIERGIAKVY-------EDLIDSPGIDSEEINSCLNGYPVFKKD 237
           R K+  L+NDHK +   IE+ +  ++       E  I +       ++S L+     ++D
Sbjct: 63  RRKLAELRNDHKDITNKIEKNLEVLHSTKLSRNEASIPASSGTPASLHSGLSQNDPMEED 122

Query: 238 ETVNDPTFATISFVDKGSPAEEAGLRAHDELVQFGSV 348
                P FA I  +  GSPA   GL+  DE+V+FG+V
Sbjct: 123 AVTRLP-FAIIDELTDGSPAAVDGLQLWDEIVKFGNV 158


>11_02_0056 +
           7828453-7828717,7829425-7829427,7829658-7829912,
           7829997-7830124,7831063-7831207,7832178-7832275,
           7833253-7833395,7835119-7835239,7835492-7835584,
           7835712-7835828
          Length = 455

 Score = 36.3 bits (80), Expect = 0.035
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +1

Query: 268 ISFVDKGSPAEEAGLRAHDELVQFGSVNYKNFKDVSQIMRIVSHSINYGITVIVRR-ENA 444
           +  V  GSPAE AG R  D +V+F     K  + + +I+ I+   +     V+V+R  N 
Sbjct: 384 VPMVTPGSPAEHAGFRPGDVVVEFDG---KLVESIKEIIDIMGDKVGVPFKVLVKRANNV 440

Query: 445 DLTFELVPK 471
            ++  ++P+
Sbjct: 441 TVSLTVIPE 449


>09_06_0270 +
           21954652-21955245,21955827-21955964,21956050-21956295,
           21956407-21956520,21956633-21956815,21956926-21957143,
           21957210-21957246,21957865-21958219,21958284-21958337,
           21958513-21958529
          Length = 651

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +3

Query: 516 EHFLIRHILKYFSLNSLYINVVGLDFHL-HVTSFNYTLQSRIILLKYI 656
           +H+L R I KY  L  L IN   L     HVT FN ++ S +  + Y+
Sbjct: 473 KHYLPRIIRKYPELLLLDINRTMLPSSCEHVTDFNSSMYSNVYRINYL 520


>02_05_0788 +
           31758119-31758384,31758482-31758634,31759385-31759509,
           31759650-31759678,31760943-31761008,31761059-31761125,
           31761226-31761370,31761404-31761451,31762014-31762182,
           31762645-31762779,31762858-31763064,31763608-31763735,
           31763815-31763866,31764046-31764060,31764502-31764609
          Length = 570

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 486 RLSPGFWHKLEG*VSIFPPNNNCDAIIDRV*HNSH 382
           RLSPGF  ++   V I   +  C A+I    HN H
Sbjct: 378 RLSPGFEDRMSAFVGIATLSGCCQAVIPLGSHNDH 412


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,642,844
Number of Sequences: 37544
Number of extensions: 365269
Number of successful extensions: 697
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)