Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O22
         (937 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28928-14|AAL16319.1|  197|Caenorhabditis elegans Hypothetical p...    88   7e-18
AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical ...    37   0.024
U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U58753-4|AAC24435.2|  312|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>U28928-14|AAL16319.1|  197|Caenorhabditis elegans Hypothetical
           protein C44B7.1 protein.
          Length = 197

 Score = 88.2 bits (209), Expect = 7e-18
 Identities = 52/147 (35%), Positives = 80/147 (54%)
 Frame = +1

Query: 67  VRHARHKIICLQNDHKKVMQLIERGIAKVYEDLIDSPGIDSEEINSCLNGYPVFKKDETV 246
           VRHARH +ICL+ND   + + I   +    +++        E+        PV +   T 
Sbjct: 55  VRHARHDLICLRNDRAALTEKIVVEMENENKEVSGQTATSEEK--------PVHR---TS 103

Query: 247 NDPTFATISFVDKGSPAEEAGLRAHDELVQFGSVNYKNFKDVSQIMRIVSHSINYGITVI 426
           N+P F  IS V + SPA+  G R  D ++Q+G++++ NF D+ ++ +I   S +  I V 
Sbjct: 104 NEP-FVKISSVVELSPADIGGFRKDDLIIQYGNLHHGNFNDMQEVAQITKQSEDKIIRVT 162

Query: 427 VRRENADLTFELVPKPWAKPGLLGCQI 507
           V REN  +  E+ PK W+ PGLLGC I
Sbjct: 163 VIRENRPVRLEICPKKWSGPGLLGCNI 189


>AF040661-1|AAK82922.2|  508|Caenorhabditis elegans Hypothetical
           protein W10G11.19 protein.
          Length = 508

 Score = 36.7 bits (81), Expect = 0.024
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = +1

Query: 121 MQLIERGIAKVYEDL-IDS-PGIDSEEINSCLNGYPVFKKDETVNDPTFATISFVDKGSP 294
           ++L ++   K+Y +L +DS P  D+ E+   L  + +F+KDET  + TF    ++  G  
Sbjct: 93  VELFQKFADKLYTNLALDSLPIFDAGELKKSLKNFEIFEKDET--EETFPFDFWMKIGE- 149

Query: 295 AEEAGLRAHDELVQFGSV-NYKNFKDVSQIMRIVSHSINYGITVIVRRENA 444
             E   R  D  V F    ++++++ +S  +  +  S   G  V  + EN+
Sbjct: 150 -NELKTRNRDRFVLFTRADSFEHWEAISHFLDALKRSKQIGYVVDCKNENS 199


>U21323-5|AAA62550.1|  124|Caenorhabditis elegans Hypothetical
           protein C45G9.7 protein.
          Length = 124

 Score = 33.5 bits (73), Expect = 0.22
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +1

Query: 268 ISFVDKGSPAEEAGLRAHDELVQFGSVNY 354
           I+ V+ GSPA+ AGLR HD+++Q    ++
Sbjct: 63  ITNVESGSPADVAGLRKHDKILQVNGADF 91


>U58753-4|AAC24435.2|  312|Caenorhabditis elegans Hypothetical
           protein W03B1.7 protein.
          Length = 312

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
 Frame = +3

Query: 498 MSDTNKE--HFLIRHILKYFSLNSLYINVVGLDFHLHVTSFNYTLQSRII 641
           + D NK+  + ++R I     LNS Y++   L   L +T+F YTL++ I+
Sbjct: 199 IEDQNKQFKNRVVRKIDDNNRLNSSYVSYFSLAALLFITAFPYTLKASIV 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,569,669
Number of Sequences: 27780
Number of extensions: 363946
Number of successful extensions: 827
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)