Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O16
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583...    34   0.18 
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375...    31   1.2  
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062...    29   3.8  
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120...    29   5.0  
01_04_0102 + 16030094-16030462,16030595-16030714,16031715-160317...    29   6.6  

>03_05_0712 -
           27057858-27057941,27058093-27058182,27058268-27058384,
           27059759-27059866,27060314-27060406,27060499-27060669,
           27061505-27061757,27061860-27062138,27062939-27063273,
           27063364-27064332,27064711-27065182,27065243-27065291,
           27066564-27066804,27067606-27067695,27068172-27068294,
           27068365-27068418
          Length = 1175

 Score = 33.9 bits (74), Expect = 0.18
 Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = -1

Query: 194 YQQQH-RTLLLLAKQQRVTKRQNN-VKSIESSSFSLKF----CISYH 72
           YQQ H R LL+LAK+  V KRQNN     ++ S SLK     C  YH
Sbjct: 460 YQQWHLRKLLVLAKEDAVCKRQNNHDPDTQTHSRSLKLLDIVCFYYH 506


>02_05_0008 +
           24934917-24935229,24936387-24936608,24936876-24937591,
           24937646-24937728,24938448-24938514,24938833-24939228,
           24939276-24939318,24939380-24939474,24940287-24940314,
           24940636-24940754
          Length = 693

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +1

Query: 442 WELTEEGELVANNGSHEAVLYRSIPDSGVPQSEVMKMVPMPRWDSVKPCHLDGYT*INQV 621
           WE+ ++  L     +        +P    P     K+VP+P  +SV+ C +D     +  
Sbjct: 138 WEIYDDSGLAFTTFNMYWEKCMELPIDASPSLAPWKLVPVPGLESVRSCSVDDLGLESSK 197

Query: 622 DRPSSNVKLI 651
           D  SSN  L+
Sbjct: 198 DEESSNALLM 207


>04_04_0294 +
           24204563-24204748,24205531-24205620,24205980-24206211,
           24207180-24207457,24207576-24207647,24208054-24208295,
           24208781-24209197,24209296-24209497,24209624-24209738,
           24209821-24209906,24210235-24210354,24210431-24210519,
           24210588-24210669,24211072-24211263,24211546-24211668
          Length = 841

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 265 EELRM-ELNERILKYLENSDKADTLKLCEEFNEEHQKIV 378
           ++LR+ +L E I+ Y E+S   + LK C E+  +H K+V
Sbjct: 350 QDLRIGKLFEIIVDYPESSPAIEDLKQCLEYTGQHSKLV 388


>07_03_1287 +
           25510813-25510862,25511326-25511504,25511715-25512037,
           25512160-25513950
          Length = 780

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 23/87 (26%), Positives = 40/87 (45%)
 Frame = +1

Query: 232 FYNLKKLKYSGEELRMELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEALEM 411
           +Y L K  +  E+L  E     L  +E++  +++  L E   E  +++    +  EALE 
Sbjct: 630 YYTLSKKVHEAEQLAHESVTEALAQVESAKASESNSL-ERLCEASKRMN---EKKEALER 685

Query: 412 VISEAVKITKWELTEEGELVANNGSHE 492
            +  A +  + +LT E EL      HE
Sbjct: 686 ALERAERANQGKLTAEQELRKWRADHE 712


>01_04_0102 +
           16030094-16030462,16030595-16030714,16031715-16031792,
           16032760-16032933,16033844-16033921,16034338-16034510,
           16034757-16034912,16036460-16036621,16036815-16036826,
           16036947-16036962,16037663-16037875
          Length = 516

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
 Frame = +1

Query: 199 WNSESWSSVLRFYNLKKLKYSGEELRMELNERILKYLENSDKADTLKLCEEFNEEHQKIV 378
           +N+E   ++ +    KKL+++  ++ +  ++R L Y   S     + +     E H  I 
Sbjct: 130 YNAEKKWTIHKDITCKKLRWTVSDIALSPDQRYLAYSSLSPIVHMVDIQNGMRESHANIT 189

Query: 379 GAVKSLEALEMVISEAVKITKWELTEEG-ELVANNGSHEAVLY 504
              + LE        +  I   + +++G ELV  N +    +Y
Sbjct: 190 QVHEGLEFSNDDDGFSFAIFSVKFSKDGRELVVGNNNESICIY 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,670,870
Number of Sequences: 37544
Number of extensions: 325310
Number of successful extensions: 803
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)