Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O15
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X83271-1|CAA58244.1|  106|Drosophila melanogaster dTFIIA-S protein.   191   1e-48
AE014297-3399|AAF56199.1|  106|Drosophila melanogaster CG5163-PA...   191   1e-48
AY113478-1|AAM29483.1|  106|Drosophila melanogaster RE44302p pro...   188   7e-48
AE014298-137|AAF45575.1|  107|Drosophila melanogaster CG11639-PA...   113   2e-25

>X83271-1|CAA58244.1|  106|Drosophila melanogaster dTFIIA-S protein.
          Length = 106

 Score =  191 bits (465), Expect = 1e-48
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +3

Query: 51  LSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 230
           +SYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RVK+R+TFKA
Sbjct: 1   MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60

Query: 231 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 359
           GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61  GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103


>AE014297-3399|AAF56199.1|  106|Drosophila melanogaster CG5163-PA
           protein.
          Length = 106

 Score =  191 bits (465), Expect = 1e-48
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = +3

Query: 51  LSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 230
           +SYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQFDKSIN AL+ RVK+R+TFKA
Sbjct: 1   MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQRVKARVTFKA 60

Query: 231 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 359
           GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61  GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103


>AY113478-1|AAM29483.1|  106|Drosophila melanogaster RE44302p
           protein.
          Length = 106

 Score =  188 bits (459), Expect = 7e-48
 Identities = 87/103 (84%), Positives = 95/103 (92%)
 Frame = +3

Query: 51  LSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 230
           +SYQLYRNTT+GNTLQESLDELIQYGQITP LA KVLLQ DKSIN AL+ RVK+R+TFKA
Sbjct: 1   MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQLDKSINNALNQRVKARVTFKA 60

Query: 231 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDGKN 359
           GKLNTYRFCDNVWT MLNDVEFREV E+ KV+KVKIVACDGK+
Sbjct: 61  GKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACDGKS 103


>AE014298-137|AAF45575.1|  107|Drosophila melanogaster CG11639-PA
           protein.
          Length = 107

 Score =  113 bits (273), Expect = 2e-25
 Identities = 54/101 (53%), Positives = 73/101 (72%)
 Frame = +3

Query: 51  LSYQLYRNTTIGNTLQESLDELIQYGQITPALAVKVLLQFDKSINQALSNRVKSRLTFKA 230
           ++YQ YR TT+G TLQ++LDE+++ G IT  +A  VLL++DKSI+ AL +   S ++F A
Sbjct: 1   MNYQHYRATTLGRTLQDTLDEMMERGDITKKIANLVLLRYDKSISTALKDHGTSNMSFTA 60

Query: 231 GKLNTYRFCDNVWTFMLNDVEFREVQELAKVEKVKIVACDG 353
            +L T+R CDNVWT +L D EFRE Q   KV+ VKIVAC G
Sbjct: 61  ERLETFRCCDNVWTLILKDAEFREDQHSLKVDVVKIVACLG 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,675,571
Number of Sequences: 53049
Number of extensions: 487367
Number of successful extensions: 1046
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)