Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_O09
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr...    33   0.36 
AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical ...    32   0.63 
Z49207-6|CAJ58500.1|  348|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z49207-5|CAA89070.1|  402|Caenorhabditis elegans Hypothetical pr...    30   1.9  

>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
            C29A12.4 protein.
          Length = 1560

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/69 (21%), Positives = 33/69 (47%)
 Frame = -2

Query: 449  RPEELNAVALPTFVDVHKAVSTHKVDETVVIRHLHPTIVANHLDVAVISTNINHAVVSDY 270
            R  +L  + + T + +  A +T  +D+  ++RH   T + +     +   N+N  ++ D 
Sbjct: 1232 RASDLVLLNMQTRISIGAAFNTRHLDQKRLLRHRRNTEIFDSYQGEISGVNVNGLMILDL 1291

Query: 269  FEKTRVRLH 243
            +E    R+H
Sbjct: 1292 YENGSNRIH 1300


>AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical
           protein R08F11.1 protein.
          Length = 884

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -2

Query: 368 TVVIRHLHPTIVANHLDVAVISTNINHAVVSDYFEKTRVRLHCHFSIVTNN 216
           TVV+ HL P I  ++ D ++   N    V +D +E+  V +   F   T N
Sbjct: 211 TVVVEHLSPVIPGDYSDSSLPLANFEFHVFNDSYEEVEVSITMSFRNGTGN 261


>Z49207-6|CAJ58500.1|  348|Caenorhabditis elegans Hypothetical
           protein R07E3.1b protein.
          Length = 348

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 374 DETVVIRHLHPTIVANHLDVAVISTNINHAVVSDYFEKTRVR 249
           DE    R++H   +AN +D+  ++   N   V+D++  TR++
Sbjct: 198 DEDKAFRYIHRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIK 239


>Z49207-5|CAA89070.1|  402|Caenorhabditis elegans Hypothetical
           protein R07E3.1a protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -2

Query: 374 DETVVIRHLHPTIVANHLDVAVISTNINHAVVSDYFEKTRVR 249
           DE    R++H   +AN +D+  ++   N   V+D++  TR++
Sbjct: 252 DEDKAFRYIHRNGLANAVDLPYVAHRQNGCAVNDHWNTTRIK 293


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,741,457
Number of Sequences: 27780
Number of extensions: 350976
Number of successful extensions: 907
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)