Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_O07
(924 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 40 4e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 38 0.003
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.025
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.033
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.033
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.033
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 32 0.099
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.17
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 24 0.58
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 29 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 2.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.8
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 3.7
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.5
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 26 8.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 8.6
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 8.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXP 900
PP PP PP P+ + PP PPP P P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 34.7 bits (76), Expect = 0.019
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHP 912
PP P PP P+ + PP P P P P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Score = 34.3 bits (75), Expect = 0.025
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPP----PXXPXPPXXXPPPKXPXXHP 912
P PP P PP P+ + PP P P P P P P PK P
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAP 1131
Score = 34.3 bits (75), Expect = 0.025
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPP----PXXPXPPXXXPPPKXPXXHP 912
PP P PP P+ + PP P P P P P PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP 1198
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXP 900
PP P PP P+ + PP P P P P P PP P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 32.7 bits (71), Expect = 0.075
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 4/53 (7%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPP-PQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHP 912
P PP P PP P+ + PP P P P P P PP P P
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHP 912
P P PP P+ PP PPP P P P PP P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 32.7 bits (71), Expect = 0.075
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
PP PP PP P + PP P P PP P + P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPV-PVPTAKAPPVPAPSSEAP 1247
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPP-PQXNXXXPPXPPP----PXXPXPPXXXPPPKXPXXHPXXXP 924
P PP P PP P + PP P P P P P P PK P P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHPXXXP 924
P PP P PP P+ + P PPP P P P P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 5/58 (8%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPP----PXXPXPPXXXPP-PKXPXXHPXXXP 924
P PP P PP PP P P P P P PP PK P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPP----PXXPXPPXXXPPPKXPXXHP 912
P PP P PP PP P P P P P P PK P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PP PPP P N P PP P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKP 999
Score = 29.1 bits (62), Expect = 0.93
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = +1
Query: 793 PXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHP 912
P PPP P + P P P P P P P PK P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP 1102
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
P P P PP P+ + PP P P PP P P P P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPV-PLPSADAPPIPVPSTAPPVPIPTSTP 1050
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXPPPXXPXXPPP 914
PP PPP P P P P PPP
Sbjct: 1189 PPVPPPSEAPPVP-KPSVGVPPVPPP 1213
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Frame = +1
Query: 805 PPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXPXXHPXXXP 924
PP P + PP P P P P P P PK P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP 1064
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPP---PXXPXPPXXXPPPKXP 900
P PP P P PP P P P P P PP P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/53 (26%), Positives = 14/53 (26%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
P PP P PP P P P P P P H P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASP 1265
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.5 bits (83), Expect = 0.003
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
PP PPPPP PP P P P P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMS---VPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Frame = +1
Query: 778 PPXXPPXXPPP--PPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHP 912
P PP P PPQ + PP PPP P PP P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP-PPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
P P PP PQ PP P P PP PPP P P
Sbjct: 1683 PAHPVSTPPVRPQS--AAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 778 PPXXPPXXPPPP--PQXNXXXPPXPPPPXXPXPPXXXPPP 891
PP P PPPP P P PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXP-PPXXPXXPPPXXP 923
PP PP P P P P P PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 840 PXPPPGXPXPA--PXXPPPXXPXXPPPXXP 923
P PP P PA P PPP P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPP-PPXXPXPPXXXPPPKXP 900
P PP PPP P PP P P P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPP 855
PP PP PPPP PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPP 873
PP PPPPP PP PPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP--PPPP 30
Score = 32.7 bits (71), Expect = 0.075
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 835 PPXPPPPXXPXPPXXXPPPKXP 900
PP PPPP PP PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.23
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXPPPXXPXXPPP 914
PP PP P P PP P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 599 PPPEXRPXGGXXPQXXPPPGXP 664
PPP P G P PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPP 816
P P PP PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
P P P PPP PP PPPP PPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = +1
Query: 766 PXXXPPXXP----PXXPPPPPQXNXXXPPXPPPP 855
P PP P P PPPPP PP PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
P P PPP PP PPPP PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
PP PP P P P PP P PP PPP P P
Sbjct: 732 PPPPPPAVIVPTPAP-APIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 840 PXPPPGXPXPAPXXPPPXXPXXPPP 914
P PPP P A PPP P PPP
Sbjct: 761 PPPPPPPPGVAGAGPPP--PPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXPPPXXPXXPPPXXP 923
PP P G P P P P PPP P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 22.2 bits (45), Expect(3) = 0.86
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 398 GXAPPPXPXPP 366
G PPP P PP
Sbjct: 772 GAGPPPPPPPP 782
Score = 21.8 bits (44), Expect(3) = 0.86
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 389 PPPXPXPPA 363
PPP P PPA
Sbjct: 776 PPPPPPPPA 784
Score = 21.4 bits (43), Expect(3) = 0.86
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 551 GXXXPPSPPPG 519
G PP PPPG
Sbjct: 759 GGPPPPPPPPG 769
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.025
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 12/61 (19%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPP------------PPXXPXPPXXXPPPKXPXXH 909
P PP PP PP P PP PP P P PP PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 910 P 912
P
Sbjct: 484 P 484
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
P PP PP PP P P P P PP P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 781 PXXPPXXP--PPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
P PP P PP P PP PP P PP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAP-PPAPAPAPAAP 487
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXP--XPPXXXP--PPKXPXXHPXXXP 924
P P P PP PP P PP P PP P PP P P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPP-PPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHP 912
P PP P P PP N PP P P P PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 29.1 bits (62), Expect = 0.93
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 790 PPXXPPP--PPQXNXXXPPXPPPPXXPXPPXXXP-PPKXPXXHP 912
PP PP PP PP PP P P PP P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 793 PXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPK 894
P PPPP + N PP P PPP+
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 802 PPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
PPPPP + P PP P PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHPXXXP 924
P P P PP PP N P P P P P P P
Sbjct: 242 PERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/60 (36%), Positives = 22/60 (36%), Gaps = 19/60 (31%)
Frame = +1
Query: 790 PPXXPPP-------PP----QXNXXXPPXPPPP------XXPXPP--XXXPPPKXPXXHP 912
PP PPP PP N PP PPPP P PP PPP P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXP-PPXXPXXPPPXXP 923
PP PPP A P PP PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Frame = +1
Query: 802 PPPPPQXNXXXPPXPPPP-XXPXPPXXXPPPKXPXXHPXXXP 924
PP PP PP P P PP PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 27.1 bits (57), Expect = 3.7
Identities = 23/109 (21%), Positives = 30/109 (27%)
Frame = +1
Query: 574 PXPXGNXXXAPRKXAXXRXXPPXXXPPRPXLKNXXXQXPXGAXPQXXTXXXXXXXXXXXX 753
P P + + A + PP PP P + + P G +
Sbjct: 291 PLPPPSSRVSAAALAANKKRPP---PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 754 XXXXPXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
P P PPPPP + PPP PP P
Sbjct: 348 AGSIPL---PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.033
Identities = 21/53 (39%), Positives = 21/53 (39%)
Frame = -2
Query: 923 GXXXGWXXGXXGGGXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXGGXXXG 765
G G G GG GG G GG GG F GG GG GG G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGG----GPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 32.7 bits (71), Expect = 0.075
Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = -2
Query: 911 GWXXGXXGGGXXXGGXGXXGGGGXGGXXW--XFWGGGGGXXGGXXGGXXXG 765
G G G G GG G GGG GG +GGG G GG GG G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGG-PGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 32.7 bits (71), Expect = 0.075
Identities = 22/50 (44%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 923 GXXXGWXXGXXGG-GXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXGG 777
G G G GG G GG G GGG GG GG GG GG GG
Sbjct: 217 GHHHGGHGGFGGGPGGFEGGPGGFGGG-PGGFGGGL-GGFGGGPGGFGGG 264
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.9 bits (74), Expect = 0.033
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXP---PPPXXPXPPXXXPP--PKXPXXHPXXXP 924
P PP P P PP P PPP P P PP P P P P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPP--XPPPPXXPXPPXXXPPP 891
PP P PP + PP PP P P P PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PP P P + P P P PP PPP
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPP--PPXXPXPPXXXPPP 891
P PP PP P PP P P P P PPP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/79 (26%), Positives = 22/79 (27%)
Frame = +1
Query: 634 PPXXXPPRPXLKNXXXQXPXGAXPQXXTXXXXXXXXXXXXXXXXPXXXPPXXPPXXPPPP 813
PP PPRP + P A P P PP P P
Sbjct: 139 PPTSAPPRPSIP---PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Query: 814 PQXNXXXPPXPPPPXXPXP 870
P P PPPP P
Sbjct: 196 PMP----PKVPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 8/53 (15%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPP------PPXXPXPPXXXP--PPKXP 900
P P PP PP + PP P PP P P P PPK P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXPXXHP 912
P P P PP P PPP PP P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP 172
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 840 PXPPPGXPXPAPXXPPPXXP 899
P PPP P PAP P P
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.033
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = -2
Query: 923 GXXXGWXXGXXGG-GXXXGGXGXXGGGGXGGXXWXFWGGGG--GXXGGXXGG 777
G G G GG G GG G GGG GG G GG G GG GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 31.5 bits (68), Expect = 0.17
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 899 GXXGG-GXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXGGXXXG 765
G GG G GG G GG G F GG GG GG GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGG-----FGGGRGGARGGGRGGARGG 46
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 922 GXXGGGXXGXXGGGXXGA--GXGXPGGGXGG 836
G GGG G GGG GA G G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 911 GWXXGXXGGGXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXGG 777
G G GG G G GG G G GG G GG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -2
Query: 911 GWXXGXXGG-GXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXG 780
G G GG G GG G GGG GG GG G GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGG-RGGARGGGRGGARGGRGGRGG 52
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 922 GXXGGGXXGXXGGGXXGAGXGXPGGGXGG 836
G GG G G G G G GG GG
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 32.3 bits (70), Expect = 0.099
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -2
Query: 923 GXXXGWXXGXXGGGXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGG 789
G G G GG G G GGG GG F GG G G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = -2
Query: 923 GXXXGWXXGXXG--GGXXXGGXGXXGGGGXGGXXWXFWGGG-GGXXGGXXGG 777
G G+ G G GG G GGG GG GG GG GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = -2
Query: 899 GXXGGGXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXGGXXXG 765
G G G GG G GG G F GGG GG GG G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGF---GGGSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 923 GXXXGWXXGXXGGGXXXGGXGXXGGGGXGGXXWXF 819
G G G GGG G G GG GG F
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRGRF 194
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPP 236
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 249
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 275
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 288
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 301
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 314
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 327
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 790 PPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P PPPP + PPPP P PPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP 340
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 24.2 bits (50), Expect(2) = 0.58
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 868 PPXXXPPPKXPXXHP 912
PP PPP P HP
Sbjct: 107 PPSQLPPPPQPQSHP 121
Score = 23.8 bits (49), Expect(2) = 0.58
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPP 849
PP P PPP P N P P
Sbjct: 51 PPHTNPQGPPPFPLFNSISPVYDP 74
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 907 GXXGXXGGGXXGAGXGXPGGGXG 839
G G GG G G G PGGG G
Sbjct: 75 GLNGQPGGPGGGPGEGFPGGGFG 97
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXPPPXXPXXPP 911
PP P P P PPP P PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 837 PPXPPPGXPXPAPXXPPPXXPXXPPPXXP 923
P PP PA P P PPP P
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 5/50 (10%)
Frame = +1
Query: 790 PPXXPPPPPQX-NXXXPPXPPPPXXPXPPXXXPP--PKXP--XXHPXXXP 924
P PPP PQ + P P P P P PP P P HP P
Sbjct: 151 PVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLP 200
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1
Query: 766 PXXXPPXXPPXXPPPPPQXNXXXPPXPPPP 855
P P PPPPP + P PP P
Sbjct: 732 PTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPP 891
P P P P P P PPP P P P
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 913 GGGXXGXXGGGXXGAGXGXPGGGXGG 836
GG G GG GA G PGG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 805 PPPPQXNXXXPPXPPPP 855
PPPP + PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -2
Query: 890 GGGXXXGGXGXXGGGGXGGXXWXFWGGGGGXXGGXXG 780
GGG G G GG G GG +GG G G
Sbjct: 225 GGGLGGAGLGGLGGAGLGG-----FGGANNATAGIAG 256
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 913 GGGXXGXXGGGXXGAGXGXPGG 848
GGG G GG GAG G GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +1
Query: 802 PPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
PPPPPQ N P PP + P
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAP 239
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +1
Query: 781 PXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
P P PP P P PP P P P+ P
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRP 623
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +1
Query: 778 PPXXPPXXPPPPPQXNXXXPPXPPPPXXPXPPXXXPPPKXP 900
PP PP PP P P P P P PP P
Sbjct: 522 PPMVPPGMALPPGMP-APFPGYPAVPAMPGIPGATAPPGAP 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.307 0.146 0.499
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,898,672
Number of Sequences: 5004
Number of extensions: 26790
Number of successful extensions: 544
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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