Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_O06
(941 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 25 0.75
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 5.3
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 7.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 9.3
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 9.3
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 9.3
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 9.3
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 9.3
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 25.4 bits (53), Expect = 0.75
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 374 GLMNSLPPSGDQEANVSASRTK 439
GL+N+LPPS +E +TK
Sbjct: 524 GLLNALPPSSMKETEEEKKKTK 545
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 4.0
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -3
Query: 204 LVTHRVPMSAVSSTPVVVIPREPDASSLSGITDRLLLRAWQNSPCRIRFKTQNLKEF 34
L TH V+ + +++ PD SSL + LL + W + R+R+ ++ EF
Sbjct: 129 LRTHLRGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDP--RLRYSNRSQYEF 183
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 5.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 928 KPXPPPPP 905
KP PPPPP
Sbjct: 340 KPAPPPPP 347
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 7.0
Identities = 6/26 (23%), Positives = 17/26 (65%)
Frame = -3
Query: 498 LTYQNRLHKKIIVIVFWNSNFVLLAD 421
L +++ H + ++++W+ ++LAD
Sbjct: 158 LIFESWTHNVLDMVLYWDQEPIILAD 183
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 7.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -2
Query: 940 FXXXKPXPPPPP 905
F +P PPPPP
Sbjct: 369 FDLDEPLPPPPP 380
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 9.3
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 94 QEQPVRNARQAGSVRFTRNHHNWGARYGRHRDAMRDKEPTTVYELDSLAVHTEELMEKYT 273
+E+ ++ + S R R +R + R+ R KEP + L + +H K
Sbjct: 43 REREKKSYKNENSYRKYRETSKERSRDRKERE--RSKEPKIISSLSNKTIHNNNNNYKKL 100
Query: 274 PKSNKNY 294
N NY
Sbjct: 101 QYYNINY 107
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 9.3
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 94 QEQPVRNARQAGSVRFTRNHHNWGARYGRHRDAMRDKEPTTVYELDSLAVHTEELMEKYT 273
+E+ ++ + S R R +R + R+ R KEP + L + +H K
Sbjct: 43 REREKKSYKNENSYRKYRETSKERSRDRKERE--RSKEPKIISSLSNKTIHNNNNNYKKL 100
Query: 274 PKSNKNY 294
N NY
Sbjct: 101 QYYNINY 107
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 9.3
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 94 QEQPVRNARQAGSVRFTRNHHNWGARYGRHRDAMRDKEPTTVYELDSLAVHTEELMEKYT 273
+E+ ++ + S R R +R + R+ R KEP + L + +H K
Sbjct: 43 REREKKSYKNENSYRKYRETSKERSRDRKERE--RSKEPKIISSLSNKTIHNNNNNYKKL 100
Query: 274 PKSNKNY 294
N NY
Sbjct: 101 QYYNINY 107
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 9.3
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 94 QEQPVRNARQAGSVRFTRNHHNWGARYGRHRDAMRDKEPTTVYELDSLAVHTEELMEKYT 273
+E+ ++ + S R R +R + R+ R KEP + L + +H K
Sbjct: 43 REREKKSYKNENSYRKYRETSKERSRDRKERE--RSKEPKIISSLSNKTIHNNNNNYKKL 100
Query: 274 PKSNKNY 294
N NY
Sbjct: 101 QYYNINY 107
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 9.3
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +1
Query: 94 QEQPVRNARQAGSVRFTRNHHNWGARYGRHRDAMRDKEPTTVYELDSLAVHTEELMEKYT 273
+E+ ++ + S R R +R + R+ R KEP + L + +H K
Sbjct: 276 REREKKSYKNENSYRKYRETSKERSRDRKERE--RSKEPKIISSLSNKTIHNNNNNYKKL 333
Query: 274 PKSNKNY 294
N NY
Sbjct: 334 QYYNINY 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,147
Number of Sequences: 438
Number of extensions: 4282
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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