Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N22
(982 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.10
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.10
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.10
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 33 0.31
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 33 0.31
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 33 0.31
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.41
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 32 0.72
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.95
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 0.95
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 0.95
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.95
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.7
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 31 1.7
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.7
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 31 1.7
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 2.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 2.2
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.8
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 5.1
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 5.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.1
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 5.1
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 5.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 6.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 6.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.7
U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helica... 29 6.7
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 6.7
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 6.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 6.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 6.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 6.7
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.7
AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen prot... 29 6.7
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical p... 28 8.8
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 28 8.8
U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protei... 28 8.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 28 8.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 8.8
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.8
AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical... 28 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.014
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = +3
Query: 585 TAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSG 764
+A+ P PP P+ PPP P G P PP G G P +SG
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG----PPPPPPPG-GLPP--ISG 756
Query: 765 EXXRXGXTGPRXPPGXC---XXSXPPXXXRXGXPPDP 866
G P PPG C PP + G PP P
Sbjct: 757 -----GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P ++ P P P P G P P P P P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PITGGP--PPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXX 837
P P PP P P PPP G P P P P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 838 XPXXVXPRTXGXXXVXXPP 894
P P G PP
Sbjct: 768 CPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.014
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = +3
Query: 585 TAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSG 764
+A+ P PP P+ PPP P G P PP G G P +SG
Sbjct: 704 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG----PPPPPPPG-GLPP--ISG 756
Query: 765 EXXRXGXTGPRXPPGXC---XXSXPPXXXRXGXPPDP 866
G P PPG C PP + G PP P
Sbjct: 757 -----GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P ++ P P P P G P P P P P P PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PITGGP--PPPPPPGGLPPISGGPPPPPP 763
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXX 837
P P PP P P PPP G P P P P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 838 XPXXVXPRTXGXXXVXXPP 894
P P G PP
Sbjct: 768 CPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.014
Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Frame = +3
Query: 585 TAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSG 764
+A+ P PP P+ PPP P G P PP G G P +SG
Sbjct: 287 SALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGG----PPPPPPPG-GLPP--ISG 339
Query: 765 EXXRXGXTGPRXPPGXC---XXSXPPXXXRXGXPPDP 866
G P PPG C PP + G PP P
Sbjct: 340 -----GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P ++ P P P P G P P P P P P PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLP--PITGGP--PPPPPPGGLPPISGGPPPPPP 346
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXX 837
P P PP P P PPP G P P P P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 838 XPXXVXPRTXGXXXVXXPP 894
P P G PP
Sbjct: 351 CPPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.10
Identities = 38/141 (26%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Frame = +1
Query: 523 KRXRPXTXXPXXXGVPXPXXKPXLS-QXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPA 699
KR P P P P P L+ P P P G P P PP PA
Sbjct: 228 KRQAPPAGSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 285
Query: 700 XXXSPL----GPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRT- 864
P PPP R + P A P P G P P R+
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSP 344
Query: 865 -XGXXXVXXPPXXGTXPXGAP 924
G PP G P G P
Sbjct: 345 PTGSPPTGSPP-TGRPPRGGP 364
Score = 31.9 bits (69), Expect = 0.72
Identities = 30/123 (24%), Positives = 34/123 (27%), Gaps = 2/123 (1%)
Frame = +3
Query: 612 PPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVV-SGEXXRXGXT 788
PP P+ PPP SP +P PP G P S R G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPP--RTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 789 GPRXPP-GXCXXSXPPXXXRXGXPPDPXXXXSAXPPXXRXPAXXSXXSXXPXXTXXAPSA 965
P PP G P G PP PP + A T P+
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 357
Query: 966 XXP 974
P
Sbjct: 358 RPP 360
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/126 (22%), Positives = 30/126 (23%), Gaps = 1/126 (0%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P P P P P P P G PP
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 360
Query: 730 XGW-ARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXGT 906
G + S P PRG R PR P G+
Sbjct: 361 RGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGS 420
Query: 907 XPXGAP 924
P G P
Sbjct: 421 PPTGRP 426
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +1
Query: 709 SPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXX 888
SP PPP + S P PA P PR + P P P P G
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGS---PP 290
Query: 889 PPXXGTXPXGAPXPXXQXQXRXPXP 963
PP G+ P P P P
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.10
Identities = 38/141 (26%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Frame = +1
Query: 523 KRXRPXTXXPXXXGVPXPXXKPXLS-QXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPA 699
KR P P P P P L+ P P P G P P PP PA
Sbjct: 249 KRQAPPAGSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 306
Query: 700 XXXSPL----GPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRT- 864
P PPP R + P A P P G P P R+
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSP 365
Query: 865 -XGXXXVXXPPXXGTXPXGAP 924
G PP G P G P
Sbjct: 366 PTGSPPTGSPP-TGRPPRGGP 385
Score = 31.9 bits (69), Expect = 0.72
Identities = 30/123 (24%), Positives = 34/123 (27%), Gaps = 2/123 (1%)
Frame = +3
Query: 612 PPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVV-SGEXXRXGXT 788
PP P+ PPP SP +P PP G P S R G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPP--RTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 789 GPRXPP-GXCXXSXPPXXXRXGXPPDPXXXXSAXPPXXRXPAXXSXXSXXPXXTXXAPSA 965
P PP G P G PP PP + A T P+
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 378
Query: 966 XXP 974
P
Sbjct: 379 RPP 381
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/126 (22%), Positives = 30/126 (23%), Gaps = 1/126 (0%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P P P P P P P G PP
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 381
Query: 730 XGW-ARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXGT 906
G + S P PRG R PR P G+
Sbjct: 382 RGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGS 441
Query: 907 XPXGAP 924
P G P
Sbjct: 442 PPTGRP 447
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +1
Query: 709 SPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXX 888
SP PPP + S P PA P PR + P P P P G
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGS---PP 311
Query: 889 PPXXGTXPXGAPXPXXQXQXRXPXP 963
PP G+ P P P P
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.10
Identities = 38/141 (26%), Positives = 41/141 (29%), Gaps = 7/141 (4%)
Frame = +1
Query: 523 KRXRPXTXXPXXXGVPXPXXKPXLS-QXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPA 699
KR P P P P P L+ P P P G P P PP PA
Sbjct: 234 KRQAPPAGSPPPP--PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPA 291
Query: 700 XXXSPL----GPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRT- 864
P PPP R + P A P P G P P R+
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP-PPAGTGSPPPPPRQKRQAPERSP 350
Query: 865 -XGXXXVXXPPXXGTXPXGAP 924
G PP G P G P
Sbjct: 351 PTGSPPTGSPP-TGRPPRGGP 370
Score = 31.9 bits (69), Expect = 0.72
Identities = 30/123 (24%), Positives = 34/123 (27%), Gaps = 2/123 (1%)
Frame = +3
Query: 612 PPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVV-SGEXXRXGXT 788
PP P+ PPP SP +P PP G P S R G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPP--RTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 789 GPRXPP-GXCXXSXPPXXXRXGXPPDPXXXXSAXPPXXRXPAXXSXXSXXPXXTXXAPSA 965
P PP G P G PP PP + A T P+
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTG 363
Query: 966 XXP 974
P
Sbjct: 364 RPP 366
Score = 29.9 bits (64), Expect = 2.9
Identities = 28/126 (22%), Positives = 30/126 (23%), Gaps = 1/126 (0%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P G P P P P P P P P P G PP
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPP 366
Query: 730 XGW-ARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXGT 906
G + S P PRG R PR P G+
Sbjct: 367 RGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPPTGS 426
Query: 907 XPXGAP 924
P G P
Sbjct: 427 PPTGRP 432
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +1
Query: 709 SPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXX 888
SP PPP + S P PA P PR + P P P P G
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPP--PPPAGGS---PP 296
Query: 889 PPXXGTXPXGAPXPXXQXQXRXPXP 963
PP G+ P P P P
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPP 321
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 696 GXXXXAPXXP-PXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXX 872
G P P P G P G+ G GPR PPG P G DP
Sbjct: 172 GGMPGMPGLPGPSGRDGYPGE-KGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGD 230
Query: 873 XXSAXPPXXRXP 908
S PP P
Sbjct: 231 LGSVGPPGPPGP 242
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 696 GXXXXAPXXP-PXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXX 872
G P P P G P G+ G GPR PPG P G DP
Sbjct: 172 GGMPGMPGLPGPSGRDGYPGE-KGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGD 230
Query: 873 XXSAXPPXXRXP 908
S PP P
Sbjct: 231 LGSVGPPGPPGP 242
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 33.1 bits (72), Expect = 0.31
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +3
Query: 696 GXXXXAPXXP-PXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXX 872
G P P P G P G+ G GPR PPG P G DP
Sbjct: 172 GGMPGMPGLPGPSGRDGYPGE-KGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGD 230
Query: 873 XXSAXPPXXRXP 908
S PP P
Sbjct: 231 LGSVGPPGPPGP 242
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.41
Identities = 28/123 (22%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Frame = +1
Query: 574 PXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXP----PXXPAXXXSPLGPPPXGWA 741
P P P P P G P P P P + PPP +
Sbjct: 339 PQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFG 398
Query: 742 RCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXGTXPXGA 921
+ P P P P P P G PP G P GA
Sbjct: 399 APQGPGGPGGYGPPP--PGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGA 456
Query: 922 PXP 930
P P
Sbjct: 457 PPP 459
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.9 bits (69), Expect = 0.72
Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 535 PXTXXPXXXGVPXPXXKPXLSQXPK-PHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXS 711
P P +P P P ++ K P P P+ P P P PP PA
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP-PPPPPALEQE 528
Query: 712 PLGPP 726
GPP
Sbjct: 529 ISGPP 533
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 31.5 bits (68), Expect = 0.95
Identities = 31/136 (22%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Frame = +1
Query: 562 GVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPPXGWA 741
G P +P P P P P PP P +P G P
Sbjct: 114 GKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP-GDPGEAGT 172
Query: 742 RCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXG-TXPXG 918
R + P P P G A +P P P P P G + P G
Sbjct: 173 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG--TPAISEPLTPGAPGEPGDSGPPG 230
Query: 919 APXPXXQXQXRXPXPP 966
P P P P
Sbjct: 231 PPGPPGAPGNDGPPGP 246
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 740 AQPXGGGPRGXXXXAGXXGGXGXXGXXGXPXL 645
A P GPRG AG G G G G P +
Sbjct: 180 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAI 211
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 0.95
Identities = 31/136 (22%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Frame = +1
Query: 562 GVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPPXGWA 741
G P +P P P P P PP P +P G P
Sbjct: 109 GKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP-GDPGEAGT 167
Query: 742 RCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXG-TXPXG 918
R + P P P G A +P P P P P G + P G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG--TPAISEPLTPGAPGEPGDSGPPG 225
Query: 919 APXPXXQXQXRXPXPP 966
P P P P
Sbjct: 226 PPGPPGAPGNDGPPGP 241
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 740 AQPXGGGPRGXXXXAGXXGGXGXXGXXGXPXL 645
A P GPRG AG G G G G P +
Sbjct: 175 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAI 206
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 0.95
Identities = 31/136 (22%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Frame = +1
Query: 562 GVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPPXGWA 741
G P +P P P P P PP P +P G P
Sbjct: 109 GKPGKPGRPGAPGTPGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAP-GDPGEAGT 167
Query: 742 RCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXG-TXPXG 918
R + P P P G A +P P P P P G + P G
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG--TPAISEPLTPGAPGEPGDSGPPG 225
Query: 919 APXPXXQXQXRXPXPP 966
P P P P
Sbjct: 226 PPGPPGAPGNDGPPGP 241
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 740 AQPXGGGPRGXXXXAGXXGGXGXXGXXGXPXL 645
A P GPRG AG G G G G P +
Sbjct: 175 AAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAI 206
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.95
Identities = 24/81 (29%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Frame = +3
Query: 636 PVVKXXXSXPPPXXXSP---XXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTG--PRX 800
P K S PPP P G P PP G G P +GE G R
Sbjct: 160 PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRR 219
Query: 801 PPGXCXXSXPPXXXRXGXPPD 863
PP + P G P D
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQD 240
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Frame = +3
Query: 636 PVVKXXXSXPPPXXXSPXXX---GXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTG--PRX 800
P K + PPP P G P PP G G P +GE G R
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRR 157
Query: 801 PPGXCXXSXPPXXXRXGXPPD 863
PP + P G P D
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQD 178
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 7/83 (8%)
Frame = +3
Query: 636 PVVKXXXSXPPPXXXSPXXX---GXXXXAPXXPPXGLGXVPXVVSGE----XXRXGXTGP 794
P K + PPP P G P PP G G P +GE G
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASR 94
Query: 795 RXPPGXCXXSXPPXXXRXGXPPD 863
R PP PP G P D
Sbjct: 95 RPPPPPKGTGTPPPPP-TGEPQD 116
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPP-PXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPX 834
P P P P PA G P P G A P PA P P G A P P
Sbjct: 186 PPGPPGPPGPAGPAGNDGAAGTPGPDGPA-----GESTYPEPAGPGPAGPPGPAGPPGPD 240
Query: 835 XXPXXVXPRTXGXXXVXXPPXXGTXPXGAPXP 930
P G P P GAP P
Sbjct: 241 GASPTAAPGAAG-------PPGPPGPAGAPGP 265
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/56 (32%), Positives = 20/56 (35%)
Frame = +1
Query: 676 PXPPXXPAXXXSPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXP 843
P P P +PL PPP + C S V P P P P P P P
Sbjct: 76 PSPSCCPYVPPAPLPPPPPPASPCCGPSPV--PAPCCPPPPAPAAPCCPPPPPPTP 129
Score = 28.7 bits (61), Expect = 6.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +1
Query: 568 PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P P P + P P P P P P P PP PA P PPP
Sbjct: 76 PSPSCCPYVPPAPLPPPPPPASPCCGPSPVP-APCCP-PPPAPAAPCCPPPPPP 127
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.3
Identities = 28/92 (30%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPP-PXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPX 834
P P P P PA G P P G A P PA P P G A P P
Sbjct: 185 PPGPPGPSGPAGPAGNDGAAGTPGPDGPA-----GESTYPEPAAPGPAGPPGPAGPPGPD 239
Query: 835 XXPXXVXPRTXGXXXVXXPPXXGTXPXGAPXP 930
P G P P GAP P
Sbjct: 240 GASPTAAPGAAG-------PPGPPGPAGAPGP 264
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +1
Query: 535 PXTXXPXXXGV--PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXX 708
P P G+ P P P + P P P G P P PP P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP--PPGMR 342
Query: 709 SPLG-PPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXP 831
P G PPP + P P P P G P P
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +3
Query: 714 PXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXXXXSAXPP 893
P PP G +GE + G GPR PPG P R G P +P + P
Sbjct: 217 PDGPPGAPGN-----AGEDGKPGDQGPRGPPG--IPGAPGQPGRPGPPGEPGTYKTEVGP 269
Query: 894 XXRXPA 911
R A
Sbjct: 270 AGRAGA 275
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/133 (21%), Positives = 33/133 (24%), Gaps = 5/133 (3%)
Frame = +3
Query: 594 KPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXP-PXGLGXVPXVVSGEX 770
KP P PV PPP P P P G P G+
Sbjct: 124 KPGAPGLPGNPGKPPVQPCEPITPPPCKPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDA 183
Query: 771 X--RXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXXXXSAXPPXXRXPAXXSXXSXXPXX 944
G GP PPG P P +P P P + P
Sbjct: 184 PPGEAGPKGPPGPPGSPGAPGEPGRPGDDAPSEPLIPGEPGPQGPPGPPGQAGPDGQPGA 243
Query: 945 T--XXAPSAXXPP 977
P + PP
Sbjct: 244 PGGPGTPGSKGPP 256
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.7
Identities = 27/102 (26%), Positives = 30/102 (29%), Gaps = 3/102 (2%)
Frame = +1
Query: 535 PXTXXPXXXGV--PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXX 708
P P G+ P P P + P P P G P P PP P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP--PPGMR 352
Query: 709 SPLG-PPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXP 831
P G PPP + P P P P G P P
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 30.7 bits (66), Expect = 1.7
Identities = 21/66 (31%), Positives = 25/66 (37%)
Frame = +3
Query: 714 PXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXXXXSAXPP 893
P PP G +GE + G GPR PPG P R G P +P + P
Sbjct: 198 PDGPPGAPGN-----AGEDGKPGDQGPRGPPG--IPGAPGQPGRPGPPGEPGTYKTEVGP 250
Query: 894 XXRXPA 911
R A
Sbjct: 251 AGRAGA 256
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 30.3 bits (65), Expect = 2.2
Identities = 32/110 (29%), Positives = 33/110 (30%), Gaps = 3/110 (2%)
Frame = +3
Query: 657 SXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPX 836
S PP P G P P G P S G TGP P G PP
Sbjct: 173 SGAPPSGGPPGPFGPSGAPPSGGPPG----PFNPSEAPPSGGPTGPFDPSGAPPSGGPPG 228
Query: 837 XXR-XGXPPDPXXXXSAXPPXXRXP--AXXSXXSXXPXXTXXAPSAXXPP 977
G PP S PP P A S P AP + PP
Sbjct: 229 PFNPSGAPP------SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPP 272
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = +3
Query: 723 PPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXR-XGXPPDPXXXXSAXPPXX 899
PP G P SG G GP P G PP G PP S PP
Sbjct: 221 PPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP------SGGPPGP 274
Query: 900 RXP--AXXSXXSXXPXXTXXAPSAXXPP 977
P A S P AP + PP
Sbjct: 275 FDPSGAPPSGGPPGPFDPSGAPPSGGPP 302
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = +3
Query: 723 PPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXR-XGXPPDPXXXXSAXPPXX 899
PP G P SG G GP P G PP G PP S PP
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPP------SGGPPGP 334
Query: 900 RXP--AXXSXXSXXPXXTXXAPSAXXPP 977
P A S P AP + PP
Sbjct: 335 FDPSGAPPSGGPPGPFNPSGAPPSGGPP 362
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = +3
Query: 723 PPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXR-XGXPPDPXXXXSAXPPXX 899
PP G P SG G GP P G PP G PP S PP
Sbjct: 371 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPP------SGGPPGP 424
Query: 900 RXP--AXXSXXSXXPXXTXXAPSAXXPP 977
P A S P AP + PP
Sbjct: 425 FNPSGAPPSGGPPGPFNPSGAPPSGGPP 452
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = +3
Query: 723 PPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXR-XGXPPDPXXXXSAXPPXX 899
PP G P SG G GP P G PP G PP S PP
Sbjct: 401 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP------SGGPPGP 454
Query: 900 RXP--AXXSXXSXXPXXTXXAPSAXXPP 977
P A S P AP + PP
Sbjct: 455 FNPSGAPPSGGPPGPFNPSGAPPSGGPP 482
Score = 28.7 bits (61), Expect = 6.7
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Frame = +3
Query: 723 PPXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXR-XGXPPDPXXXXSAXPPXX 899
PP G P SG G GP P G PP G PP S PP
Sbjct: 431 PPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP------SGGPPGP 484
Query: 900 RXP--AXXSXXSXXPXXTXXAPSAXXPP 977
P A S P AP + PP
Sbjct: 485 FDPSGAPPSGGPPGPFNPSGAPPSGGPP 512
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.2
Identities = 36/152 (23%), Positives = 40/152 (26%), Gaps = 10/152 (6%)
Frame = +1
Query: 550 PXXXGVPXPXX-KPXLSQXPKPHPXXXXXPLXXXXGXPXXPXX-PXPPXXPAXXXSPLGP 723
P G P P P P P P P P P P P+ P GP
Sbjct: 116 PQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGP 175
Query: 724 P---PXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXX---PXXVXPRTXGXXXVX 885
P P + S P P SP P P P + G
Sbjct: 176 PSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPS 235
Query: 886 XPPXXGTXPX--GAPXPXXQXQXRXPXPPXXR 975
P P G P P + P PP R
Sbjct: 236 DEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRR 267
Score = 28.3 bits (60), Expect = 8.8
Identities = 32/139 (23%), Positives = 39/139 (28%), Gaps = 5/139 (3%)
Frame = +1
Query: 562 GVPXPXXKPXLSQXPKP---HPXXXXXPLXXXXGXPXXPXX-PXPPXXPAXXXSPLGPPP 729
G P +P S P P +P P P P P P P+ P GPP
Sbjct: 91 GTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPS 150
Query: 730 XGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXV-XXPPXXGT 906
G P P+ P+ + P P P+ G P
Sbjct: 151 PG-----PVDPSEDPQPSVEPSEDPQ-PSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEP 204
Query: 907 XPXGAPXPXXQXQXRXPXP 963
P G P P P P
Sbjct: 205 SPSGPPSPGPVDPSEDPKP 223
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/84 (27%), Positives = 25/84 (29%)
Frame = +3
Query: 615 PXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTGP 794
P P K PP P G P PP G P +GE G GP
Sbjct: 128 PCEPLTPPPCKPCPEGPPGPAGPPGPDGNK--GPLGPPGPPG--PEGPNGEPGNKGPAGP 183
Query: 795 RXPPGXCXXSXPPXXXRXGXPPDP 866
P G + PP P P
Sbjct: 184 PGPGGKPGPAGPPGENGNNGEPQP 207
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXP--PXXPAXXXSPLGP 723
P G P P L+ P P PL P P P P P PLGP
Sbjct: 103 PGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGP 162
Query: 724 P-PXG 735
P P G
Sbjct: 163 PGPPG 167
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXP--PXXPAXXXSPLGP 723
P G P P L+ P P P+ P P P P P PLGP
Sbjct: 101 PGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGP 160
Query: 724 P-PXG 735
P P G
Sbjct: 161 PGPPG 165
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/75 (29%), Positives = 22/75 (29%)
Frame = -2
Query: 891 GGXHSXASXGPGGXRXGXXXGGGTXXXXPGXXGXXXGRXGXSHXRXXXXXXXXXXXXXXG 712
GG H S PGG R G GG G G G G H R G
Sbjct: 239 GGRHGSRSGSPGG-RHGHGGHGG-HGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSCSG 296
Query: 711 RXXXRRXXGGXXXXG 667
R GG G
Sbjct: 297 SPRGRHGHGGHGGHG 311
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Frame = +3
Query: 567 AXPXXKTAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPP--XGL- 737
A P TA P TP +P + PPP SP G P PP G
Sbjct: 1195 AIPSTSTAAHPGLTTPMASIFQSPTM------PPPHTPSPFSAGPMSHHPMGPPAYPGTP 1248
Query: 738 GXVPXVVSGEXXRXGXTGPR-XPPGXCXXSXPPXXXRXGXPP 860
G P GP PPG + G PP
Sbjct: 1249 GSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPP 1290
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Frame = +3
Query: 567 AXPXXKTAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPP--XGL- 737
A P TA P TP +P + PPP SP G P PP G
Sbjct: 1195 AIPSTSTAAHPGLTTPMASIFQSPTM------PPPHTPSPFSAGPMSHHPMGPPAYPGTP 1248
Query: 738 GXVPXVVSGEXXRXGXTGPR-XPPGXCXXSXPPXXXRXGXPP 860
G P GP PPG + G PP
Sbjct: 1249 GSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPP 1290
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.1 bits (62), Expect = 5.1
Identities = 33/132 (25%), Positives = 34/132 (25%), Gaps = 7/132 (5%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P GVP KP P P P P P P P P
Sbjct: 109 PGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGD 168
Query: 730 XGWARC--RXXSXVRXPXPAXXXPXXPRGXARSPXP---XXXPXXVXPRTXGXXXVXXP- 891
G A R + P P P G A P P P P T G
Sbjct: 169 PGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDA 228
Query: 892 -PXXGTXPXGAP 924
P P GAP
Sbjct: 229 GPAGPPGPPGAP 240
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/91 (25%), Positives = 30/91 (32%), Gaps = 5/91 (5%)
Frame = +1
Query: 568 PXPXXKPXLSQXPKPH-PXXXXXPLXXXXGX---PXXPXXPXPPXXPAXXXSPLGPPPXG 735
P P P + + P P P P+ P P P P P SP+ PPP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
Query: 736 W-ARCRXXSXVRXPXPAXXXPXXPRGXARSP 825
+ R R P P R ++ P
Sbjct: 198 LNSHDRRALRARRPMVHRPAPYGRRSISQGP 228
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 5.1
Identities = 28/102 (27%), Positives = 31/102 (30%), Gaps = 4/102 (3%)
Frame = +3
Query: 567 AXPXXKTAIKPXXQTPPXXXXXTPVVKXXXSXPPPXXXSPXXXGXXXXAPXXPP--XGL- 737
A P TA P TP +P + PPP SP G P PP G
Sbjct: 1195 AIPSTSTAAHPGLTTPMASIFQSPTM------PPPHTPSPFSAGPMSHHPMGPPAYPGTP 1248
Query: 738 GXVPXVVSGEXXRXGXTGPR-XPPGXCXXSXPPXXXRXGXPP 860
G P GP PPG + G PP
Sbjct: 1249 GSFPPTTPTYPGMTPRPGPNFGPPGPVYPNSQQMMGPGGYPP 1290
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.1 bits (62), Expect = 5.1
Identities = 33/132 (25%), Positives = 34/132 (25%), Gaps = 7/132 (5%)
Frame = +1
Query: 550 PXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P GVP KP P P P P P P P P
Sbjct: 109 PGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAPGD 168
Query: 730 XGWARC--RXXSXVRXPXPAXXXPXXPRGXARSPXP---XXXPXXVXPRTXGXXXVXXP- 891
G A R + P P P G A P P P P T G
Sbjct: 169 PGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDA 228
Query: 892 -PXXGTXPXGAP 924
P P GAP
Sbjct: 229 GPAGPPGPPGAP 240
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -3
Query: 923 GAPXGXVPXXGGXXTXXXPXVRGXTXXGXXXGXGLRAXPRGXXGXXXAGXGXLTXDXXRH 744
GA G GG P G G + G G G +
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQP 145
Query: 743 LAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
QP GGP G AG G G G G P
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -3
Query: 923 GAPXGXVPXXGGXXTXXXPXVRGXTXXGXXXGXGLRAXPRGXXGXXXAGXGXLTXDXXRH 744
GA G GG P G G + G G G +
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQP 145
Query: 743 LAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
QP GGP G AG G G G G P
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 6.7
Identities = 29/124 (23%), Positives = 33/124 (26%), Gaps = 1/124 (0%)
Frame = +1
Query: 598 QXPKPHPXXXXXPLXXXXGXPXXPXXPXPP-XXPAXXXSPLGPPPXGWARCRXXSXVRXP 774
Q P P P P P P PP P PPP + + P
Sbjct: 25 QPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPPAPYPQ------HAVP 78
Query: 775 XPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXXVXXPPXXGTXPXGAPXPXXQXQXRX 954
PA P+ P P P P+ P AP P Q
Sbjct: 79 APAPPLASYPQNAVPVPAPPPAP---YPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPP 135
Query: 955 PXPP 966
P PP
Sbjct: 136 PPPP 139
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 574 PXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P P + P P P P+ P P P PP P P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPP---PICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U21308-11|AAB93312.3| 265|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform b
protein.
Length = 265
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 663 PPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPG 809
PP +P G P PP G G R G GP PPG
Sbjct: 202 PPGPKGNPGPDGQSYQGPPGPPGDSG-----TPGHEGRAGPNGPAGPPG 245
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 663 PPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPG 809
PP +P G P PP G G R G GP PPG
Sbjct: 266 PPGPKGNPGPDGQSYQGPPGPPGDSG-----TPGHEGRAGPNGPAGPPG 309
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 663 PPPXXXSPXXXGXXXXAPXXPPXGLGXVPXVVSGEXXRXGXTGPRXPPG 809
PP +P G P PP G G R G GP PPG
Sbjct: 266 PPGPKGNPGPDGQSYQGPPGPPGDSG-----TPGHEGRAGPNGPAGPPG 309
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -3
Query: 923 GAPXGXVPXXGGXXTXXXPXVRGXTXXGXXXGXGLRAXPRGXXGXXXAGXGXLTXDXXRH 744
GA G GG P G G + G G G +
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQP 145
Query: 743 LAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
QP GGP G AG G G G G P
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/91 (26%), Positives = 26/91 (28%)
Frame = -3
Query: 923 GAPXGXVPXXGGXXTXXXPXVRGXTXXGXXXGXGLRAXPRGXXGXXXAGXGXLTXDXXRH 744
GA G GG P G G + G G G +
Sbjct: 86 GAGGGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQP 145
Query: 743 LAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
QP GGP G AG G G G G P
Sbjct: 146 PCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 658 PXXPXXPXPPXXPAXXXSPLGPPP 729
P P P PP P+ +P+ PPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPP 1359
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.7
Identities = 34/151 (22%), Positives = 41/151 (27%), Gaps = 6/151 (3%)
Frame = +1
Query: 532 RPXTXXPXXXGVPXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXP-XPPXXPAXXX 708
+P P G P L P+P P P P P PP P
Sbjct: 665 QPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGV 724
Query: 709 SPLGP---PPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXVXPRTXGXXX 879
P P PP G+ + + P P G P P P G
Sbjct: 725 GPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPP----PPRGGMHH 780
Query: 880 VXXPP--XXGTXPXGAPXPXXQXQXRXPXPP 966
+ PP G G P P + PP
Sbjct: 781 MPPPPSFRGGRGGHGGPPPPHFDRRGGGGPP 811
>AC024775-6|AAK68452.2| 304|Caenorhabditis elegans Collagen protein
108 protein.
Length = 304
Score = 28.7 bits (61), Expect = 6.7
Identities = 24/99 (24%), Positives = 26/99 (26%)
Frame = -3
Query: 947 CXXWXXGXGAPXGXVPXXGGXXTXXXPXVRGXTXXGXXXGXGLRAXPRGXXGXXXAGXGX 768
C G P G G + P G G A P G G + G
Sbjct: 150 CKPCPQGPAGPPGPPGPAGDAGSDGSPGAPGSDGQPGAAGDKGPAGPNGNPGAPGS-PGK 208
Query: 767 LTXDXXRHLAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
D P GP G G G G G G P
Sbjct: 209 PGEDGKSEPITPGAPGPAGPPGPQGPPGAPGQPGHDGQP 247
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 794 PXXPGXLXXVPPPXXXPXRXPPGPXXAXECXPP 892
P P + PPP P PP P A C PP
Sbjct: 245 PPSPVCMPPPPPPCPMPIPCPP-PPPACSCPPP 276
>Z69383-13|CAA93404.2| 181|Caenorhabditis elegans Hypothetical
protein F13E9.8 protein.
Length = 181
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 758 DXXRHLAQPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
D HLA P G P G G GG G G G P
Sbjct: 123 DTLMHLAHP--GPPHGGPGGPGGPGGRGGRGGHGGP 156
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 737 QPXGGGPRGXXXXAGXXGGXGXXGXXGXP 651
QP GPRG AG G G G G P
Sbjct: 221 QPGRAGPRGPRGVAGIKGKDGAPGSPGQP 249
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +3
Query: 696 GXXXXAPXXP-PXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXX 872
G P P P G P G+ G GPR PPG P G DP
Sbjct: 172 GGMPGMPGLPGPSGRDGYPGE-KGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGD 230
Query: 873 XXSAXPPXXRXP 908
+ P P
Sbjct: 231 IGAMGPAGPPGP 242
>U88166-3|AAO44910.1| 160|Caenorhabditis elegans Collagen protein
53 protein.
Length = 160
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +3
Query: 657 SXPPPXXXSPXXXGXXXXAPXXPPXGLGXVPX---VVSGEXXRXGXTGPRXPPG 809
S PP P G P G P V G + G TGPR PPG
Sbjct: 36 SAPPSIRGEPGERGDKGFPGVAGPAGEPGEPGHIYVSDGPPGKDGETGPRGPPG 89
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/72 (27%), Positives = 22/72 (30%), Gaps = 1/72 (1%)
Frame = +3
Query: 696 GXXXXAPXXP-PXGLGXVPXVVSGEXXRXGXTGPRXPPGXCXXSXPPXXXRXGXPPDPXX 872
G P P P G P G+ G GPR PPG P G DP
Sbjct: 172 GGMPGMPGLPGPSGRDGYPGE-KGDRGDTGNAGPRGPPGEAGSPGNPGIGSIGPKGDPGD 230
Query: 873 XXSAXPPXXRXP 908
+ P P
Sbjct: 231 IGAMGPAGPPGP 242
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = -2
Query: 972 GGWRXGXPXLXLXXWXGXSXRXGXXPWGGXHSXASXGPGGXRXGXXXGGGTXXXXPGXXG 793
GG G W G + G GG GP G G GG G G
Sbjct: 111 GGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGG 170
Query: 792 XXXGRXGXSHXR 757
G G + R
Sbjct: 171 RGGGGGGGAGER 182
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 8.8
Identities = 25/102 (24%), Positives = 26/102 (25%)
Frame = +1
Query: 652 GXPXXPXXPXPPXXPAXXXSPLGPPPXGWARCRXXSXVRXPXPAXXXPXXPRGXARSPXP 831
G P P P PP P P P G + V P P P G P
Sbjct: 208 GSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVN--SPGGPGPAGPPGPPGPPGQ 265
Query: 832 XXXPXXVXPRTXGXXXVXXPPXXGTXPXGAPXPXXQXQXRXP 957
P G PP P G P Q P
Sbjct: 266 DGSGGAAQP---GPPGPPGPPGNDGQPGGPGQPGGPGQDGGP 304
>AC084154-11|AAK29874.1| 350|Caenorhabditis elegans Hypothetical
protein Y22D7AR.1 protein.
Length = 350
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 568 PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPP 726
P P KP PKP+P P P P P P P P
Sbjct: 183 PKPKPKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNP 235
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +1
Query: 568 PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPP 729
P P KP PKP P P P P P P +P P P
Sbjct: 187 PKPKPKPKPKPNPKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNP-NPKP 239
Score = 28.3 bits (60), Expect = 8.8
Identities = 26/129 (20%), Positives = 35/129 (27%), Gaps = 1/129 (0%)
Frame = +1
Query: 568 PXPXXKPXLSQXPKPHPXXXXXPLXXXXGXPXXPXXPXPPXXPAXXXSPLGPPPXGWARC 747
P P KP PKP P P P P P P P P P +
Sbjct: 199 PKPEPKPKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKP-KPKPEPKPKT 257
Query: 748 RXXSXVRXPXPAXXXPXXPRGXARSPXPXXXPXXV-XPRTXGXXXVXXPPXXGTXPXGAP 924
+ S + P +P P P P + P + P P
Sbjct: 258 KLKSEPKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKP 317
Query: 925 XPXXQXQXR 951
P + + +
Sbjct: 318 KPRPKPELK 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,718,731
Number of Sequences: 27780
Number of extensions: 172409
Number of successful extensions: 2129
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1692
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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