Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_N21
         (1013 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0501 + 22764978-22765896,22766087-22766349,22766613-227668...    30   3.4  
09_02_0543 + 10427321-10428315,10428440-10429154                       29   4.5  
01_01_0070 - 542603-542686,542803-543441                               29   5.9  

>01_05_0501 +
           22764978-22765896,22766087-22766349,22766613-22766836,
           22767419-22767749,22767968-22768372
          Length = 713

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 15/43 (34%), Positives = 16/43 (37%)
 Frame = +2

Query: 599 PPRPPXPXTPXPX*PTXXSXXAXXPQXSGSSXPXRXRIPXQXP 727
           PP PP P  P P  P      +  P    SS P   R P   P
Sbjct: 79  PPPPPPPPPPVPVPPAYSVTSSVPPYSMTSSLPPSPRPPPPLP 121


>09_02_0543 + 10427321-10428315,10428440-10429154
          Length = 569

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 20/88 (22%), Positives = 22/88 (25%)
 Frame = +3

Query: 510 PXXXPPXXRGFXXXXXPPTXSXXXPKKKXXPPAPLXLXXLXPINPPXPLKXXXXRKXPAX 689
           P    P  +       P +     P     PP P       P  PP P         PA 
Sbjct: 15  PPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGPAA 74

Query: 690 XXXXXXESPXNXPXXXPXRXXPQXXXXP 773
                  SP N P   P    P     P
Sbjct: 75  APSPHSPSPSNAPWVAPAADIPPPPPPP 102


>01_01_0070 - 542603-542686,542803-543441
          Length = 240

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
 Frame = +2

Query: 587 KKXXPPRPPXPXTPXPX*PTXXS-XXAXXPQXSGSSXPXRXRIPXQXPANXTXXXXPP 757
           K   PP  P P TP P  P   S   A  P     S P     P + PA       PP
Sbjct: 89  KAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPPVAAPAEAPAALPPATTPP 146


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,036,002
Number of Sequences: 37544
Number of extensions: 140739
Number of successful extensions: 774
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2987258700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)