Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N16
(1020 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.035
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.035
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.035
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.046
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.046
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 34 0.14
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.19
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.19
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.43
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.57
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 32 0.57
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 32 0.57
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 32 0.57
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.76
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.0
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 4.0
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 4.0
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 4.0
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 4.0
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 7.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 7.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 9.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 9.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.035
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P S P PP G P P PPP G P PP P P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP-----PPPGMFAPMAPVIPDYL 804
Query: 956 PP 961
PP
Sbjct: 805 PP 806
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPX-XXTCPXP 913
P P PP P P PP P S GPP PP CP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.57
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P PP P P PPP PP PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P PP P P PP P + GPP PP P S P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
PP G P PPP G PP P P P P PP
Sbjct: 731 PPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P P P G P P PP PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.035
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P S P PP G P P PPP G P PP P P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP-----PPPGMFAPMAPVIPDYL 804
Query: 956 PP 961
PP
Sbjct: 805 PP 806
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPX-XXTCPXP 913
P P PP P P PP P S GPP PP CP P
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 32.3 bits (70), Expect = 0.57
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P PP P P PPP PP PP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P PP P P PP P + GPP PP P S P PP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
PP G P PPP G PP P P P P PP
Sbjct: 731 PPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P P P G P P PP PP PP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.035
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P S P PP G P P PPP G P PP P P P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP-----PPPGMFAPMAPVIPDYL 387
Query: 956 PP 961
PP
Sbjct: 388 PP 389
Score = 33.1 bits (72), Expect = 0.33
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPX-XXTCPXP 913
P P PP P P PP P S GPP PP CP P
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 32.3 bits (70), Expect = 0.57
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P PP P P PPP PP PP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/57 (31%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP---PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P PP P P PP P + GPP PP P S P PP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
PP G P PPP G PP P P P P PP
Sbjct: 314 PPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P P P G P P PP PP PP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.9 bits (79), Expect = 0.046
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Frame = +2
Query: 785 PXSPXPXXXXXPPX----GXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPX 952
P P P PP G P P PPP + GPP P P PS P
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Query: 953 TPP 961
PP
Sbjct: 336 PPP 338
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 785 PXSPXPXXXXXPPX-GXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P S P PP G P P PP PP PP P P P P PP
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM----PGMPPPPPP 322
Query: 962 N 964
+
Sbjct: 323 S 323
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P P P P P PPP G PP P P P P
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPP 350
Query: 956 PP 961
PP
Sbjct: 351 PP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.9 bits (79), Expect = 0.046
Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Frame = +2
Query: 785 PXSPXPXXXXXPPX----GXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPX 952
P P P PP G P P PPP + GPP P P PS P
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Query: 953 TPP 961
PP
Sbjct: 346 PPP 348
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +2
Query: 785 PXSPXPXXXXXPPX-GXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P S P PP G P P PP PP PP P P P P PP
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGM----PGMPPPPPP 332
Query: 962 N 964
+
Sbjct: 333 S 333
Score = 28.3 bits (60), Expect = 9.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P P P P P PPP G PP P P P P
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPP 360
Query: 956 PP 961
PP
Sbjct: 361 PP 362
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/60 (28%), Positives = 20/60 (33%)
Frame = +3
Query: 783 PPXPPPPXXXXXXXXXPIXXPHXPXPXKAXAPPXXXQXXXAXSPXXXXTXARXQXPXPLP 962
PP PPPP P+ P P P + AP P + P PLP
Sbjct: 1338 PPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLP 1397
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXT 901
P P PP P P PPP + GPP P T
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPP--NGGPPPPSVEWT 1618
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX----SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXX 943
G P P P +P P SPPP + PP PP P P+ P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 944 XPXTPPNSXXXSVXXAXLP 1000
PP S LP
Sbjct: 295 GSPPPPPPPRGSPPTGSLP 313
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX--SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXP 949
G P P P G P P SPPP + G P PP P P P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGS 311
Query: 950 XTPPNS 967
PP +
Sbjct: 312 LPPPQA 317
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT--PP 961
PP G P PPP + G P P + P P P P T PP
Sbjct: 302 PPRGSPPTGSLPPPQ-AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX----SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXX 943
G P P P +P P SPPP + PP PP P P+ P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 944 XPXTPPNSXXXSVXXAXLP 1000
PP S LP
Sbjct: 316 GSPPPPPPPRGSPPTGSLP 334
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX--SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXP 949
G P P P G P P SPPP + G P PP P P P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGS 332
Query: 950 XTPPNS 967
PP +
Sbjct: 333 LPPPQA 338
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT--PP 961
PP G P PPP + G P P + P P P P T PP
Sbjct: 323 PPRGSPPTGSLPPPQ-AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.19
Identities = 22/79 (27%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX----SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXX 943
G P P P +P P SPPP + PP PP P P+ P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 944 XPXTPPNSXXXSVXXAXLP 1000
PP S LP
Sbjct: 301 GSPPPPPPPRGSPPTGSLP 319
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPX--SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXP 949
G P P P G P P SPPP + G P PP P P P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA-GSPPPPPPPRGSPPTGS 317
Query: 950 XTPPNS 967
PP +
Sbjct: 318 LPPPQA 323
Score = 28.3 bits (60), Expect = 9.3
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT--PP 961
PP G P PPP + G P P + P P P P T PP
Sbjct: 308 PPRGSPPTGSLPPPQ-AGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.43
Identities = 22/80 (27%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXT 955
G P P P P +P P PP PP P P P P
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPP 194
Query: 956 PP--NSXXXSVXXAXLPDXH 1009
PP NS A P H
Sbjct: 195 PPRLNSHDRRALRARRPMVH 214
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.3 bits (70), Expect = 0.57
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Frame = +2
Query: 773 VGXXPXSPXPXXXXXPPXGXNPXP------XSPPPX*SXGPPXPPXXXTCPXP 913
+G P P P PP P P PPP PP PP CP P
Sbjct: 25 MGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPS 916
P P PP P P PPP PP PP P S
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQS 89
Score = 28.7 bits (61), Expect = 7.0
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +2
Query: 818 PPXGXNPXPX-SPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
PP P P +PPP PP P P P P P PP
Sbjct: 28 PPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPP 76
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 32.3 bits (70), Expect = 0.57
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNS 967
P P PP G P P PPP G P PP P P P P PP S
Sbjct: 75 PMPHHMGMPPPGMGPPPFMPPP---IGMPPPPLG--MPPPHIGLGAAPYAVP--PPMS 125
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 32.3 bits (70), Expect = 0.57
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNS 967
P P PP G P P PPP G P PP P P P P PP S
Sbjct: 98 PMPHHMGMPPPGMGPPPFMPPP---IGMPPPPLG--MPPPHIGLGAAPYAVP--PPMS 148
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 32.3 bits (70), Expect = 0.57
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNS 967
P P PP G P P PPP G P PP P P P P PP S
Sbjct: 348 PMPHHMGMPPPGMGPPPFMPPP---IGMPPPPLG--MPPPHIGLGAAPYAVP--PPMS 398
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.9 bits (69), Expect = 0.76
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPN 964
P P PP G P PP PP PP P P P P PP+
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP---PPPPPS 121
Score = 29.1 bits (62), Expect = 5.3
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXT---CPXPSXXXXXXPXXX 946
G P P P PP PPP PP PP P PS
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPR 131
Query: 947 PXTPPN 964
P TP N
Sbjct: 132 PKTPVN 137
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 794 PXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P PP P P PP GPP PP
Sbjct: 244 PGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPP 275
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTP 958
P +P P P NP P P S PP PP PS P P P
Sbjct: 467 PTTPKPAPPP-PSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXP 949
P P P PP P P PPP PP P +CP P P
Sbjct: 56 PPPPCPAQFCPPPPICPPPP--PPPMPCPPPPPPMPRPSCPCMMQRPSFYPSYVP 108
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 783 PPXPPPPXXXXXXXXXPIXXPHXPXPXKAXAPP 881
PP PPPP P P P KA PP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNS 967
PP P P S PP PP PP P P P P PP S
Sbjct: 73 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP------IPASPPPRPPAS 116
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.5 bits (63), Expect = 4.0
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +2
Query: 818 PPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNS 967
PP P P S PP PP PP P P P P PP S
Sbjct: 295 PPLPPPPLPLSNPPAKPTPPPPPPKPTIRPPP------IPASPPPRPPAS 338
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 776 GXXPXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTC 904
G P P P PP P P +PPP PP P C
Sbjct: 120 GGVPAPPNPPRTCCPP----PTPAAPPPPPPPPPPAPEAPTQC 158
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = -1
Query: 963 LGGVXGXXNGXXXNXXEGXGXVXXXG-GXGGPXL*XGGGDXGXGLXPXGGXXLXXGXGXX 787
+GG G G G G + G G GG GGG G G+ GG G G
Sbjct: 149 MGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGG 208
Query: 786 G 784
G
Sbjct: 209 G 209
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 785 PXSPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPP 889
P P P P P PPP GPP PP
Sbjct: 559 PIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPP 593
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +2
Query: 791 SPXPXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTC-PXPSXXXXXXPXXXPXTP 958
+P P P P P PPP P P C P P+ P P TP
Sbjct: 73 APRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/67 (25%), Positives = 20/67 (29%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNSXXXS 979
P PP P P S PP PP P+ P P P + +
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 664
Query: 980 VXXAXLP 1000
A LP
Sbjct: 665 SVLAKLP 671
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/67 (25%), Positives = 20/67 (29%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNSXXXS 979
P PP P P S PP PP P+ P P P + +
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPA 490
Query: 980 VXXAXLP 1000
A LP
Sbjct: 491 SVLAKLP 497
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/55 (27%), Positives = 20/55 (36%)
Frame = +2
Query: 836 PXPXSPPPX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPPNSXXXSVXXAXLP 1000
P +PPP + PP PP P P+ P PP + A +P
Sbjct: 170 PTTEAPPPPTTKAPP-PPTTKAPPPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVP 223
>Z81055-7|CAB02897.2| 445|Caenorhabditis elegans Hypothetical
protein F01G10.9 protein.
Length = 445
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/43 (27%), Positives = 16/43 (37%)
Frame = +2
Query: 728 PXXXPTXXXXSXVHXVGXXPXSPXPXXXXXPPXGXNPXPXSPP 856
P P + +H P +P P PP P P +PP
Sbjct: 309 PMTLPVSSTTNMLHRPVPLPGAPQPMRIPLPPGAPMPMPLAPP 351
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP-PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P P P P PP + GPP PP P P P PP
Sbjct: 217 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP-PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P P P P PP + GPP PP P P P PP
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/55 (29%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Frame = +2
Query: 800 PXXXXXPPXGXNPXPXSPP-PX*SXGPPXPPXXXTCPXPSXXXXXXPXXXPXTPP 961
P P P P PP + GPP PP P P P PP
Sbjct: 212 PGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,033,914
Number of Sequences: 27780
Number of extensions: 129185
Number of successful extensions: 1484
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2688795166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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