Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_N12
         (1293 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    31   2.6  

>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 8/142 (5%)
 Frame = +2

Query: 353 LPKRX*XXPXXPXXRCSXXXXXPPSXRXGXPPXLXXPXXXGPXXXXXTX------PXKXX 514
           LP R    P  P  R        P  R   PP    P    P     T       P +  
Sbjct: 178 LPVRTTQPPTRPPTRPPTRPPTRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTP 237

Query: 515 LXTXXGXGDPPALXKXXPLXPXGKPXTPXLGNXXPPRXXTRXSPXGXSXAGXGTXKPPK- 691
             T      P        L P  KP  P      PP    R  P         T +PP  
Sbjct: 238 PPTRPPTRPPTTRPPATYLPPTNKPLPPVTTRLPPPPPSPRTPPPTRPPTRPPTTRPPAT 297

Query: 692 -LPXTXXPXXSXGXCXWXPPAP 754
            LP T  P          PP P
Sbjct: 298 YLPPTNKPLPPVTTRLPPPPPP 319


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.142    0.476 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,989,515
Number of Sequences: 53049
Number of extensions: 351569
Number of successful extensions: 597
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6987975015
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)