Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_N09
(1016 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048... 44 3e-04
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656... 44 3e-04
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767... 44 3e-04
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576... 44 3e-04
11_06_0610 - 25449085-25453284 33 0.28
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.36
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.5
10_01_0129 + 1535823-1537196 31 1.9
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.6
04_04_1125 + 31085106-31085714 30 2.6
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 3.4
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 5.9
03_02_0613 - 9848514-9848539,9848942-9849200,9849326-9849365,984... 29 7.9
>06_03_0409 -
20503480-20503678,20504522-20504717,20504805-20504847,
20505632-20505739,20505848-20505850
Length = 182
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 150 NVMRNLHITKLCLNICVGESGDRLTRAAK 236
N MR + + KL LNI VGESGDRLTRA+K
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASK 37
>05_02_0095 +
6564703-6564705,6564848-6564955,6565153-6565195,
6565303-6565409,6566310-6566395,6566396-6566594
Length = 181
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 150 NVMRNLHITKLCLNICVGESGDRLTRAAK 236
N MR + + KL LNI VGESGDRLTRA+K
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASK 37
>02_02_0195 +
7676014-7676094,7676111-7676218,7676307-7676349,
7676449-7676648
Length = 143
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 150 NVMRNLHITKLCLNICVGESGDRLTRAAK 236
N MR + + KL LNI VGESGDRLTRA+K
Sbjct: 35 NPMREIKVQKLVLNISVGESGDRLTRASK 63
>01_01_0745 +
5769150-5769152,5769268-5769375,5769812-5769854,
5769945-5770140,5770836-5771034
Length = 182
Score = 43.6 bits (98), Expect = 3e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +3
Query: 150 NVMRNLHITKLCLNICVGESGDRLTRAAK 236
N MR + + KL LNI VGESGDRLTRA+K
Sbjct: 9 NPMREIKVQKLVLNISVGESGDRLTRASK 37
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.5 bits (73), Expect = 0.28
Identities = 40/155 (25%), Positives = 48/155 (30%), Gaps = 11/155 (7%)
Frame = +2
Query: 452 PXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPX---SSPGSXRXXPXXFFXRXLGX 622
P PP +P P T PP AP G P S+P S + P
Sbjct: 605 PSPPKSTPPA--EKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPP 662
Query: 623 PPTPPXRXXAP---SPXXXXHAXL----HGXGPPXXXXGHXPXXGXRLXPV*VXXXGPDS 781
PPTP +P +P PP GH P PV P+S
Sbjct: 663 PPTPEGHTPSPPKSTPPTEKSPPTPESESSSPPPPAPEGHMPSPPKSTPPVEKSPPTPES 722
Query: 782 -XXAXMPPSPXXSXPRXXSXXHFXPXRXLXPGXPP 883
+ PP+P P S P P PP
Sbjct: 723 EASSPPPPAPEGHTP---SPPKSSPPEEKSPPIPP 754
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.1 bits (72), Expect = 0.36
Identities = 23/83 (27%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Frame = +2
Query: 446 GGPXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXL-GX 622
G P PP + G P G P PP P G P + P + G
Sbjct: 1159 GPPAPPPPAGFRGGTPPPNAHGGVAP--PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGG 1216
Query: 623 PPTPPXRXXAPSPXXXXHAXLHG 691
PP PP P+P HG
Sbjct: 1217 PPPPPGGRGLPAPPGGRGVVGHG 1239
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +2
Query: 446 GGPXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXLGXP 625
G P PP G P G PP A G P P +G P
Sbjct: 1147 GVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHG--------GVGGP 1198
Query: 626 PTPPXRXXAPSP 661
PTPP P P
Sbjct: 1199 PTPPGAPAPPMP 1210
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 452 PXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSP 571
P PP P PL+ P PP PSG P +P
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAP 1198
>10_01_0129 + 1535823-1537196
Length = 457
Score = 30.7 bits (66), Expect = 1.9
Identities = 25/72 (34%), Positives = 25/72 (34%)
Frame = +2
Query: 446 GGPXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXLGXP 625
GG P SP G PL P PSG P SSPG R P G P
Sbjct: 16 GGGGAPRGSPPGGGS--PLNSSRRSSRRP--RPSGSSPTSSPGQIRSPPDD----GDGQP 67
Query: 626 PTPPXRXXAPSP 661
P P R P
Sbjct: 68 PPPRRRRRGEPP 79
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.6
Identities = 31/123 (25%), Positives = 35/123 (28%), Gaps = 9/123 (7%)
Frame = +3
Query: 528 SPLRPPXXXXPXPP----QGPXGXXLXF-FXXVXWXXXQPPPXXXPHLXRX----AXXTP 680
+P PP P PP P F F W PP PHL + P
Sbjct: 233 TPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPP 292
Query: 681 XSTAXAXPXXXXAIXPXWAXXXXXFKXSXXXXTPXGXXCPPXPXXPXPGXPLXPTSXPYG 860
A P P + + P PP P P P PL P PY
Sbjct: 293 PPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPP---PPPPSFPWPFPPLAPLFPPYP 349
Query: 861 XSP 869
P
Sbjct: 350 SPP 352
>04_04_1125 + 31085106-31085714
Length = 202
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 777 TPXGXXCPPXPXXPXPGXPLXPTSXPYGXSP 869
TP PP P P P P PT P+ +P
Sbjct: 52 TPATPTTPPTPWTPPPATPTPPTPTPWTPTP 82
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 3.4
Identities = 38/162 (23%), Positives = 39/162 (24%), Gaps = 7/162 (4%)
Frame = +2
Query: 452 PXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXLGXPPT 631
P PP P G P PP P S P P PP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605
Query: 632 PPX------RXXAPSPXXXXHAXLHGXGPPXXXXGHXPXXGXRL-XPV*VXXXGPDSXXA 790
PP R P P H PP P RL P G
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAP 665
Query: 791 XMPPSPXXSXPRXXSXXHFXPXRXLXPGXPPAVTAXXXXGXG 916
PP P S R + P PP A G G
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPG 707
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 5.9
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +2
Query: 458 PPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXLGXPPTPP 637
PP SP PL P PP + P P P PPT P
Sbjct: 59 PPPASPPLPSATPPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLP-PTTTTTTPPTAP 117
Query: 638 XRXXAPSP 661
AP P
Sbjct: 118 VPAAAPPP 125
>03_02_0613 -
9848514-9848539,9848942-9849200,9849326-9849365,
9849952-9850117,9850228-9850756
Length = 339
Score = 28.7 bits (61), Expect = 7.9
Identities = 20/84 (23%), Positives = 24/84 (28%)
Frame = +2
Query: 449 GPXPPXXSPXXGXXXXPLTXGXXXPLXPPAAPSGXXPXSSPGSXRXXPXXFFXRXLGXPP 628
G P P P T G P P P + GS P ++ PP
Sbjct: 140 GAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVPWYYHPSTTPP 199
Query: 629 TPPXRXXAPSPXXXXHAXLHGXGP 700
PP + H HG P
Sbjct: 200 PPPPPAAHYAAHGGHHQQYHGVLP 223
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,970,266
Number of Sequences: 37544
Number of extensions: 279695
Number of successful extensions: 892
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2998973440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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