Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_N08
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-P...   145   8e-35
AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p pro...   142   4e-34
AE013599-1800|AAO41392.1|   60|Drosophila melanogaster CG33155-P...    82   9e-16
AE013599-1799|AAM68564.1|   60|Drosophila melanogaster CG33155-P...    82   9e-16
AE013599-1798|AAO41393.1|   60|Drosophila melanogaster CG33155-P...    82   9e-16

>AE013599-1797|AAM68563.1|  155|Drosophila melanogaster CG30481-PA,
           isoform A protein.
          Length = 155

 Score =  145 bits (351), Expect = 8e-35
 Identities = 64/122 (52%), Positives = 87/122 (71%)
 Frame = +1

Query: 88  YSGTIRRSKGVVSAIGKQLKAVNLKAAKKITIKFDPFGENATHTRNFAHYISAPKIAITN 267
           +SG +RRS G+VSAIGKQLK+VNLK  K+IT++FDPF EN   TR F   +S PK+A TN
Sbjct: 5   FSGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKVAATN 64

Query: 268 PNCSVKTEVLCDRSEPTVEITLLPAIAATAKIQKVTLRSENLTCLEILQLLNKHISSLAP 447
           P C VK E++CDR    ++  L+ +    A+++++   S+NL  LE+LQL NKH+SSLAP
Sbjct: 65  PKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIRFNSDNLNTLELLQLCNKHVSSLAP 124

Query: 448 VE 453
            E
Sbjct: 125 RE 126


>AY060913-1|AAL28461.1|  155|Drosophila melanogaster GM05817p
           protein.
          Length = 155

 Score =  142 bits (345), Expect = 4e-34
 Identities = 63/122 (51%), Positives = 86/122 (70%)
 Frame = +1

Query: 88  YSGTIRRSKGVVSAIGKQLKAVNLKAAKKITIKFDPFGENATHTRNFAHYISAPKIAITN 267
           + G +RRS G+VSAIGKQLK+VNLK  K+IT++FDPF EN   TR F   +S PK+A TN
Sbjct: 5   FIGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTREFLFLLSTPKVAATN 64

Query: 268 PNCSVKTEVLCDRSEPTVEITLLPAIAATAKIQKVTLRSENLTCLEILQLLNKHISSLAP 447
           P C VK E++CDR    ++  L+ +    A+++++   S+NL  LE+LQL NKH+SSLAP
Sbjct: 65  PKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIRFNSDNLNTLELLQLCNKHVSSLAP 124

Query: 448 VE 453
            E
Sbjct: 125 RE 126


>AE013599-1800|AAO41392.1|   60|Drosophila melanogaster CG33155-PD,
           isoform D protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +3

Query: 525 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 692
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


>AE013599-1799|AAM68564.1|   60|Drosophila melanogaster CG33155-PC,
           isoform C protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +3

Query: 525 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 692
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


>AE013599-1798|AAO41393.1|   60|Drosophila melanogaster CG33155-PA,
           isoform A protein.
          Length = 60

 Score = 82.2 bits (194), Expect = 9e-16
 Identities = 37/56 (66%), Positives = 48/56 (85%)
 Frame = +3

Query: 525 KPKGNLDVIEEIYRQIPAFTDVFSEDTFYVFVTFFVLSTILVAFVLSRFITIKPVE 692
           K KG L VIE+IY+ IPAF+D+F+E++FY+F   FV +TILVAF+LSRFITIKPV+
Sbjct: 4   KHKGTLAVIEKIYQDIPAFSDIFTEESFYMFAFCFVCATILVAFILSRFITIKPVD 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,229,454
Number of Sequences: 53049
Number of extensions: 641274
Number of successful extensions: 1377
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)